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New release of #IntOGen developed by @bbglab and part of INB/ELIXIR-ES portfolio. IntOGen allows for automatic and comprehensive knowledge extraction based on mutational data from sequenced tumor samples from patients. ➡️ intogen.org 👀 Read the relase tweetorial 👇🏼

20 Sep 2024
We are very happy to announce that a dual new release of intOGen (intogen.org) and boostDM (intogen.org/boostdm/) is out today! 🎉 Here is a thread summarizing the main updates:👇
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Finally here! Dual intOGen and boostDM release is out today! A great team effort 💪 One step closer towards the Automatic Learning Platform for driver discovery🥳👏
20 Sep 2024
We are very happy to announce that a dual new release of intOGen (intogen.org) and boostDM (intogen.org/boostdm/) is out today! 🎉 Here is a thread summarizing the main updates:👇
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20 Sep 2024
We want to thank the many contributions to intOGen and boostDM: those who generate and share data; those who develop methods and make them available; and of course patients who shared their sample and data for research.
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20 Sep 2024
The output of this dual intOGen boostDM release will be streamlined into the next version of the Cancer Genome Interpreter (CGI) [cancergenomeinterpreter.org/…], a new tool developed in the context of the CGI-Clinics project [cgiclinics.eu/].
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20 Sep 2024
Now intOGen and boostDM pipelines are more smoothly streamlined, which makes running one pipeline after the other less time consuming and error prone at the config setup.
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20 Sep 2024
The new intOGen updates are: ✅ Updated Hartwig Medical Foundation data ✅ The use of MANE transcripts, used in clinical practice - ncbi.nlm.nih.gov/refseq/MANE… ✅ Updated key third-party dependencies.
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20 Sep 2024
We are very happy to announce that a dual new release of intOGen (intogen.org) and boostDM (intogen.org/boostdm/) is out today! 🎉 Here is a thread summarizing the main updates:👇
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We used the excellent IntOGen pipeline (@nlbigas @IRBBarcelona) to identify 330 unique candidate cancer driver genes including 74 new candidate drivers. We also identify drivers in tumours not subject to systematic driver gene discovery initiatives. 3/
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Thank you!! I still need to fund for IntOGen but I can breathe and it’s glorious. So much love to everyone!
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Also big thanks to intOGen (@nlbigas), Cosmic Cancer Gene Census (@cosmic_sanger), the analysis of non-coding drivers by @FelixDietlein, and the @GWASCatalogall resources that this manuscript relies upon. 🤝(7/7)
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27 Jun 2023
Nice to see our latest release of IntoGen used for other platforms. Many thanks @OpenTargets for taking it into consideration.
27 Jun 2023
Packed Platform summer release🌻: 🧠 Screens from @CRISPRbrain ✂️ Gene essentiality from @CancerDepMap 💊 New drug molecules and warnings @ChEMBL 🧬 IntOGen driver predictions @bbglab 🔀 20% more ClinVar variation @NCBI_Clinical 👍👎 Missense variation from @EBIProtVar and more🧵
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27 Jun 2023
Packed Platform summer release🌻: 🧠 Screens from @CRISPRbrain ✂️ Gene essentiality from @CancerDepMap 💊 New drug molecules and warnings @ChEMBL 🧬 IntOGen driver predictions @bbglab 🔀 20% more ClinVar variation @NCBI_Clinical 👍👎 Missense variation from @EBIProtVar and more🧵
The 23.06 Platform release is now live! — and it’s a zinger
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➡️IntOGen (@bbglab) With the new version of IntOGen, the Platform incorporates 1,000 more pieces of evidence, representing 2620 unique associations ➡️@EuropePMC_news With the updates to their entity recognition pipeline, we now feature 2 million additional publications
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Replying to @guixe_m
Great job intogen team and all @bbglab contributors on it!
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A new release of IntOGen, the compendium of cancer genes, is out at intogen.org! In the near future, we will include it together with other updates in Cancer Genome Interprer to improve interpretation of cancer patients' mutations @CGIclinics

31 May 2023
We are pleased to announce that a new release of intOGen (intogen.org) is out today! 🎉 Here is a thread summarizing the main updates: 👇
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Take a look to our last IntOGen release, including databases updates and many more samples among others updates!
31 May 2023
We are pleased to announce that a new release of intOGen (intogen.org) is out today! 🎉 Here is a thread summarizing the main updates: 👇
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Replying to @guixe_m
Great work @bbglab IntOGen team! 👏🏼
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New intOGen release! Check out the new updates on cancer drivers 👀 Thanks everyone in the intOGen team 💪🥳
31 May 2023
We are pleased to announce that a new release of intOGen (intogen.org) is out today! 🎉 Here is a thread summarizing the main updates: 👇
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31 May 2023
We want to thank the many contributions to intOGen from those who generate and share data, those who develop databases and methods and make them available, and of course patients who shared their sample and data for research. More information at intogen.org/releasednotes

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New IntOGen release! Check it out👇
31 May 2023
We are pleased to announce that a new release of intOGen (intogen.org) is out today! 🎉 Here is a thread summarizing the main updates: 👇
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