Microbial Genomic Epidemiology Laboratory (MiGEL) 🦠 Research on genomic emergence/transmission of pathogens 🔬 University of Pittsburgh @PittTweet/@IDPittStop

Joined January 2019
Photos and videos
Pinned Tweet
17 Nov 2021
Our newest publication out today in Clinical Infectious Diseases (@IDSAInfo) ⤵️
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20 Oct 2024
.@vatsalars presenting in her work for genomic surveillance at #IDWeek2024! That’s a wrap for @LabMigel !
19 Oct 2024
Today at 4:15PM @ #IDWeek2024 come hear @vatsalars talk about genomic surveillance for respiratory viruses! @IDPittStop
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19 Oct 2024
Today at 4:15PM @ #IDWeek2024 come hear @vatsalars talk about genomic surveillance for respiratory viruses! @IDPittStop
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19 Oct 2024
Yesterday, @LeeHarrisonID presented findings on EDS-HAT and evidence for real-time genomic surveillance at #IDWeek2024 @IDPittStop
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MiGEL retweeted
Kady Waggle from @LabMigel at @IDPittStop up now presenting at #IDWeek2024 Cost efficient WGS in hospital outbreak investigation.
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18 Oct 2024
Our own Kady Waggle talking about the methods and economics of real-time prospective WGS surveillance at our hospital #IDWeek2024 Read her pre-print here: medrxiv.org/content/10.1101/…
26 Sep 2024
Coming to #IDWeek2024? Check out 3 of our sessions! - WGS symposia moderated by our own @SundermannAJ along with @costisifri. Presentations by @LabMigel head @LeeHarrisonID, @liliabbo, & Emily Snavely - WGS of respiratory virus by @vatsalars - WGS cost analysis by Kady Waggle!
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MiGEL retweeted
I'm excited to share the next interview in my "Meet a genomic epidemiologist" series. The interviewee is @SundermannAJ , and he shares his journey from undergraduate studies through to his current work applying genomic epidemiology for infection prevention and control.
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26 Sep 2024
Coming to #IDWeek2024? Check out 3 of our sessions! - WGS symposia moderated by our own @SundermannAJ along with @costisifri. Presentations by @LabMigel head @LeeHarrisonID, @liliabbo, & Emily Snavely - WGS of respiratory virus by @vatsalars - WGS cost analysis by Kady Waggle!
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MiGEL retweeted
Bravo, @MatthewCulyba (@TheCulybaLab) and @SundermannAJ! Congratulations to you both for this well-deserved honor. 🩺👨‍💻
Congratulations to this year's Samuel and Emma Winters Foundation awardees! 🎉 The 2024 awardees include faculty from the Department of Medicine, the Department of Epidemiology, the Department of Neurobiology, and the Department of Periodontics and Preventive Dentistry from @PittHealthSci. The awards support junior faculty engaged in biomedical research in the Pittsburgh area each year.
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MiGEL retweeted
Replying to @Illinois_micro
@Illinois_micro is back from lunch. Kicking off our afternoon is Dr. @SundermannAJ and sharing experiences of whole genome sequencing to detect clusters in real time. CC: @LabMigel and @PittTweet
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3 May 2024
Today our lab celebrated two of our students’ graduations, Hunter & Shurmin! 🎉
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MiGEL retweeted
A big congrats to the #infectiousdiseases team at #DOMResearchDay2024 🎉 Cheers to Abigail Gerberick for her best poster award and 2nd-year fellow, Mina Said, for his plenary presentation! Shoutout to all the ID division researchers as well for their efforts! #idpittstop
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MiGEL retweeted
'The Pitch: Patient Safety’s Next Generation' documentary showcases innovative #healthcare #tech, like the EDS-HAT system by @LeeHarrisonID & Artur Dubrawski; premiering at the @CIFF this week. Post-Gazette article linked below. #idpittstop 🎬 post-gazette.com/news/health…
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3 Apr 2024
Today @vatsalars is presenting her work on respiratory virus WGS surveillance at @PittPubHealth Dean’s Day!
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28 Mar 2024
Checkout this piece in @GenomeWeb on our lab’s latest pre-print!
28 Mar 2024
Sequencing Surveillance Improves Outbreak Detection in Hospital at Affordable Costs genomeweb.com/sequencing/seq…
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20 Feb 2024
🚨NEW pre-print from Waggle et al in @LabMigel ➡️We describe the laboratory, sequencing, and bioinformatics methods for our in-house bacterial WGS surveillance program 💰We calculate (including FTEs) WGS to be ~$91/isolate = feasible & affordable! 📄: medrxiv.org/content/10.1101/…
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29 Jan 2024
.@LabMigel had our lab safety meeting lead by our lab manager, Kady Waggle Don’t mouth pipette!
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18 Jan 2024
It’s a busy day in @LabMigel! Our real-time WGS surveillance of healthcare-associated COVID-19 is up and running
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New from @TedRader4MD et al Using mixed methods, @IDPittstop demonstrated utility of a selective reactive whole-genome sequencing approach to determine transmission pathways in outbreaks of COVID-19 across a healthcare system đź“„: doi.org/10.1017/ice.2023.274
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MiGEL retweeted
Congratulations to the winner of this week’s Spot Award, Deena Ereifej! Deena is a Research Assistant with the Microbial Genomics and Epidemiology Laboratory. Her contributions to EDS-HAT help identify infections sooner and save patient lives. Thank you! #idpittstop #spotawards
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13 Nov 2023
Today @LabMigel and the @UPMC Presbyterian Infection Prevention team met to discuss the past 2-years of real-time WGS surveillance for outbreak detection & intervention We shared our findings, analysis plans, wins, and next steps of EDS-HAT for our successful collaboration
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