Random molecule thoughts from today:
- I'm a water molecule in the cell. Am I warm or cold? Oh wait! I don't have temperature (too small, just feels like velocity / being bumped into by other fighter jets running at the speed of sound - ouch!) - feels mildly dehumanizing, but then again, I am a water molecules >.<
- Tiny molecules like H20 are SO much smaller than proteins, I actually had the incorrect intuition here - ~0.3nm vs ~20-30 nm for very large protein complexes (like ribosomes) - so ~100x my human size for comparison. This is like a Statue of Liberty, or a sequoia!
- One thing the H20/protein size intuition updated me on is the amount of time a molecule of that size might have to spend 'searching' the surface of the protein (ie NO in a relevant signaling context). I think I don't understand this well enough (not obvious how much ie NO signaling is limited by this given the way / speed at which it diffuses), but it was cool to at least generate a curiosity-inducing intuition from a simple thought expt!
(also, while the ChatGPT-generated image is cute and funny, I should note that molecules do not have eyes...but I do think coloring molecules while doing visual thought expts is reasonable)