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Metabolomics Papers @Metabbot

Auto-tweeting impactful #metabolomics #lipidomics #exposomics and #metabolic papers from PubMed. šŸ¤–šŸ¤–šŸ¤– . Coded by @dk_barupal

Joined February 2018
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Plant Reactome Knowledgebase: empowering plant pathway exploration and OMICS data analysis academic.oup.com/nar/articleā€¦

Plant Reactome Knowledgebase: empowering plant pathway exploration and OMICS data analysis

Abstract. Plant Reactome (https://plantreactome.gramene.org) is a freely accessible, comprehensive plant pathway knowledgebase. It providesĀ curated referen

academic.oup.com
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In @eLife: Linking genotypic and phenotypic changes in the E. coli long-term evolution experiment using metabolomics doi.org/10.7554/eLife.87039.ā€¦

Linking genotypic and phenotypic changes in the E. coli long-term evolution experiment using...

Metabolomic analysis shows how genome-wide changes in gene expression propagate to and affect the metabolomes of an organism during adaptation.

elifesciences.org
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DDBJ update in 2023: the MetaboBank for metabolomics data and associated metadata academic.oup.com/nar/articleā€¦

DDBJ update in 2023: the MetaboBank for metabolomics data and associated metadata

Abstract. The Bioinformation and DNA Data Bank of Japan (DDBJ) Center (https://www.ddbj.nig.ac.jp) provides database archives that cover a wide range of fi

academic.oup.com
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MetaboLights: open data repository for metabolomics academic.oup.com/nar/articleā€¦

MetaboLights: open data repository for metabolomics

Abstract. MetaboLights is a global database for metabolomics studies including the raw experimental data and the associated metadata. The database is cross

academic.oup.com
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Divergent Skeletal Muscle Metabolomic Signatures of Different Exercise Training Modes Independently Predict Cardiometabolic Risk Factors diabetesjournals.org/diabeteā€¦

Divergent Skeletal Muscle Metabolomic Signatures of Different Exercise Training Modes Independently...

We investigated the link between enhancement of SI (by hyperinsulinemicā€“euglycemic clamp) and muscle metabolites after 12 weeks of aerobic (high-intensity

diabetesjournals.org
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Microbiota from Alzheimerā€™s patients induce deficits in cognition and hippocampal neurogenesis academic.oup.com/brain/articā€¦
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The metabolomic physics of complex diseases | PNAS pnas.org/doi/10.1073/pnas.23ā€¦

The metabolomic physics of complex diseases | PNAS

Human diseases involve metabolic alterations. Metabolomic profiles have served as a vital biomarker for the early identification of high-risk indiv...

pnas.org
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Reinventing metabolic pathways: Independent evolution of benzoxazinoids in flowering plants | PNAS pnas.org/doi/10.1073/pnas.23ā€¦

Reinventing metabolic pathways: Independent evolution of benzoxazinoids in flowering plants | PNAS

Benzoxazinoids (BXDs) form a class of indole-derived specialized plant metabolites with broad antimicrobial and antifeedant properties. Unlike most...

pnas.org
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MsQuality ā€” an interoperable open-source package for the calculation of standardized quality metrics of mass spectrometry data academic.oup.com/bioinformatā€¦

MsQuality: an interoperable open-source package for the calculation of standardized quality metrics...

AbstractMotivation. Multiple factors can impact accuracy and reproducibility of mass spectrometry data. There is a need to integrate quality assessment and

academic.oup.com
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Metabolic phenotyping of BMI to characterize cardiometabolic risk: evidence from large population-based cohorts nature.com/articles/s41467-0ā€¦

Metabolic phenotyping of BMI to characterize cardiometabolic risk: evidence from large population...

Nature Communications - A substantial proportion of patients with cardiometabolic conditions appear to have normal BMI. Conversely, not all obese individuals exhibit these disorders. Here, we show...

nature.com
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Radiogenomic-based multiomic analysis reveals imaging intratumor heterogeneity phenotypes and therapeutic targets | Science Advances science.org/doi/10.1126/sciaā€¦

Radiogenomic-based multiomic analysis reveals imaging intratumor heterogeneity phenotypes and...

A large-scale multicenter radio-multiomic study decodes imaging intratumor heterogeneity and unravels its biological significance.

science.org
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Ī±ā€ketoglutarateā€dependent KDM6 histone demethylases regulate Interferon Stimulated Gene expression in Lupus Arthritis & Rheumatology acrjournals.onlinelibrary.wiā€¦

Ī±ā€Ketoglutarateā€“Dependent KDM6 Histone Demethylases and Interferonā€Stimulated Gene Expression in...

Objective We aimed to investigate the hypothesis that interferon (IFN)ā€“stimulated gene (ISG) expression in systemic lupus erythematosus (SLE) monocytes is linked to changes in metabolic reprogrammi...

acrjournals.onlinelibrary.wiley.com
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Spatially resolved #metabolomics and isotope tracing reveal dynamic metabolic responses of dentate granule neurons with acute stimulation nature.com/articles/s42255-0ā€¦

Spatially resolved metabolomics and isotope tracing reveal dynamic metabolic responses of dentate...

Nature Metabolism - Miller et al. use fast thermal preservation and mass spectrometry imaging to reveal rapid neuron-layer metabolic responses to stimulation within a brain slice. Stimulation...

nature.com
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Atherosclerosis progression in the APPLE trial can be predicted in young people with juvenileā€onset systemic lupus erythematosus using a novel lipid metabolomic signature Arthritis & Rheumatology acrjournals.onlinelibrary.wiā€¦

Atherosclerosis Progression in the APPLE Trial Can Be Predicted in Young People With Juvenileā€Onset...

Objective Patients with juvenile-onset systemic lupus erythematosus (JSLE) have increased atherosclerosis risk. This study investigated novel atherosclerosis progression biomarkers in the Atheroscl...

acrjournals.onlinelibrary.wiley.com
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Multi-omics profiling reveals rhythmic liver function shaped by meal timing nature.com/articles/s41467-0ā€¦

Multi-omics profiling reveals rhythmic liver function shaped by meal timing

Nature Communications - Post-translational modifications (PTMs) couple feed-fast cycles to circadian clocks. Here, the authors systematically profile daily rhythms of the proteome, 4 PTMs and...

nature.com
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Microbiome Metabolome Integration Platform (MMIP): a web-based platform for microbiome and metabolome data integration and feature identification academic.oup.com/bib/articleā€¦

Microbiome Metabolome Integration Platform (MMIP): a web-based platform for microbiome and metabo...

Abstract. A microbial community maintains its ecological dynamics via metabolite crosstalk. Hence, knowledge of the metabolome, alongside its populace, wou

academic.oup.com
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Detection, mechanisms, and therapeutic implications of oncometabolites: Trends in Endocrinology & Metabolism cell.com/trends/endocrinologā€¦
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Exercise Training Reduces the Inflammatory Response and Promotes Intestinal Mucosa-associated Immunity in Lynch Syndrome aacrjournals.org/clincancerrā€¦
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Gut microbiome correlates with plasma lipids in amyotrophic lateral sclerosis academic.oup.com/brain/articā€¦

Gut microbiome correlates with plasma lipids in amyotrophic lateral sclerosis

Guo et al. assess gut microbial community structure in ALS and identify differences versus controls in several genera, which correlate with levels of plasm

academic.oup.com
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Plasma metabolite profiles associated with the World Cancer Research Fund/American Institute for Cancer Research lifestyle score and future risk of cardiovascular disease and type 2 diabetes cardiab.biomedcentral.com/arā€¦

Plasma metabolite profiles associated with the World Cancer Research Fund/American Institute for...

Cardiovascular Diabetology - A healthy lifestyle (HL) has been inversely related to type 2 diabetes (T2D) and cardiovascular disease (CVD). However, few studies have identified a metabolite profile...

link.springer.com
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