Joined August 2019
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Photos and videos
6 May 2021
Our server for MiGA Online is back! Our apologies to all our users for the downtime microbial-genomes.org/
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24 Nov 2020
Dear users, we're happy to announce that MiGA Online is back! We have now processed all the backlog of jobs, so please feel free to submit any new genomes. We hope this downtime didn't cause too much disruption in your work.
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16 Nov 2020
Dear MiGA users, we're still experiencing some down time caused by our recent servers migration. We have now restored all data access, so you can browse and download any of your jobs, but task processing is unfortunately still down.
2 Nov 2020
TypeMat release r2020-10 is now out!
All quality-controlled genomes from prokaryotic type material in NCBI
14,054 genomes, 10,001 genomospecies (ANI > 95%), 10,867 species names
Use it online at microbial-genomes.org/projec… or get it with `miga get_db` in the command line
24 Aug 2020
TypeMat release r2020-08 is now out!
All quality-controlled genomes from prokaryotic type material in NCBI
13,508 genomes, 9,842 genomospecies (ANI > 95%), 10,446 species names
Use it online at microbial-genomes.org/projec… or get it with `miga get_db` in the command line
4 Aug 2020
We are aware that our main server is currently down and we're working on reestablishing the service as soon as possible. Apologies for the inconvenience.
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17 Jun 2020
TypeMat release r2020-06 is now out!
All quality-controlled genomes from prokaryotic type material in NCBI
13,265 genomes, 9,842 genomospecies (ANI > 95%), 10,261 species names
Use it online at microbial-genomes.org/projec… or get it with `miga get_db` in the command line
Microbial Genomes Atlas retweeted
7 Jun 2020
Evidence that cosmopolitan freshwater bacteria have smaller, more compact genomes, and description of novel Candidatus taxa using iterative subtractive binning #MicrobialEcology #BlackQueenHypothesis #Prokaryotes #Taxonomy doi.org/10.1111/1462-2920.15…
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Microbial Genomes Atlas retweeted
31 May 2020
Patterns of microbiome variation among infrapopulations of permanent bloodsucking parasites biorxiv.org/cgi/content/shor… #bioRxiv
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13 Apr 2020
TypeMat release r2020-04 is now out!
All quality-controlled genomes from prokaryotic type material in NCBI
13,062 genomes, 9,711 genomospecies (ANI > 95%), 10,125 named species
Use it online at microbial-genomes.org/projec… or get it with `miga get_db` in the command line
7 Mar 2020
TypeMat release *2020-02* is ready!
Genomes from prokaryotic type material up to Feb/2020, with a new quality control that eliminated 440 suspect genomes.
Use it in the CLI with `miga classify_wf` or online at microbial-genomes.org/projec…
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4 Feb 2020
MiGA can now directly launch jobs across nodes! This new feature allows leveraging all the wonders of HPCC without having to burden the scheduler: happier admins, happier users manual.microbial-genomes.org…
6 Jan 2020
TypeMat release *2019-12* is out now! All available genomes from prokaryotic type material up to Dec/2019. Download it using `miga download` or start using it now at microbial-genomes.org/projec…
7 Sep 2019
At long last, multiple-file uploads in MiGA! Create up to 100 queries at once in MiGA Online microbial-genomes.com
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25 Nov 2019
MiGA Workflows are now live! Check out the initial batch of workflows here: manual.microbial-genomes.org…
Now you can easily run standard tasks in MiGA with a single command, including genome quality evaluation, de-replication, and taxonomic classification!