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Spinal Cord Toolbox (SCT) @SpinalToolbox

News about SCT, the comprehensive open-source neuroimaging software application to process & analyze spinal cord MRI data. Developed & supported by @polyneuro

Joined December 2020
  • Tweets 75
  • Following 8
  • Followers 173
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Spinal Cord Toolbox (SCT)@SpinalToolbox
22 Dec 2020
Hello! Follow us for news from the #SpinalCordToolbox #opensource #neuroimaging software project. Visit spinalcordtoolbox.com for documentation, or to get involved in our discussion forums, bug reports, or code.
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We are happy to announce that a new version of SCT (v7.3) has been released! 🎉 Check out our announcement on @INCForg's @neuroquestion forum: neurostars.org/t/spinal-cord…

Spinal Cord Toolbox (SCT) - New release v7.3

Dear neuroimaging community, We are happy to announce the release of SCT v7.3. The most notable changes for this release include: Feature: Add deep learning-based motion correction algorithm (-dl...

neurostars.org
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📢 We are happy to announce that we will be hosting a free virtual Spinal Cord Toolbox (SCT) Course on December 8-9, 2025. 🎉 Check out our announcement on @INCForg's @neuroquestion forum: neurostars.org/t/announcemen… Course details can be found here: spinalcordmri.org/2025/12/08…

📢 Announcement: SCT Course (Dec 8-9, 2025)

Dear Spinal Cord MRI community, We will be offering a free course on the Spinal Cord Toolbox (SCT). WHEN: December 8-9 2025 WHERE: Virtual (on Zoom) More details and registration link: Have a lovely...

neurostars.org
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We are happy to announce that a new version of SCT (v7.1) has been released! 🎉 Check out our announcement on @INCForg's @neuroquestion forum: neurostars.org/t/spinal-cord…

Spinal Cord Toolbox (SCT) - New release v7.1

Dear neuroimaging community, We are happy to announce the release of SCT v7.1. The most notable changes for this release include: Installation: Add support for Apptainer installations for use on HPC...

neurostars.org
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We are happy to announce that a new major version of SCT (v7.0) has been released! 🎉 Check out our announcement on @INCForg's @neuroquestion forum: neurostars.org/t/spinal-cord…

Spinal Cord Toolbox (SCT) - New release v7.0

Dear neuroimaging community, We are happy to announce the release of SCT v7.0. The most notable changes for this major release include: Feature: Overhauled sct_deepseg syntax, interface, and model...

neurostars.org
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📢 We are happy to announce that we will be hosting a free virtual Spinal Cord Toolbox (SCT) Course on December 9-10, 2024. 🎉 Check out our announcement on @INCForg's @neuroquestion forum: neurostars.org/t/spinal-cord… Course details can be found here: spinalcordmri.org/2024/12/09…

📢 Spinal Cord Toolbox (SCT) Course (Dec 9-10, 2024)

Dear Spinal Cord MRI community, We will be offering a free course on the Spinal Cord Toolbox (SCT). WHEN: December 9-10 2024 WHERE: Virtual (on Zoom) More details and registration link: Regardless of...

neurostars.org
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We are happy to announce that a new version of SCT (v6.4) has been released! 🎉 Check out our announcement on @INCForg's @neuroquestion forum: neurostars.org/t/spinal-cord…

Spinal Cord Toolbox (SCT) - New release v6.4

Dear neuroimaging community, We are happy to announce the release of SCT v6.4. The most notable changes for this release include: Feature: Add midsagittal tissue bridges to sct_analyze_lesion. View...

neurostars.org
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We are happy to announce that a new version of SCT (v6.3) has been released! 🎉 Check out our announcement on @INCForg's @neuroquestion forum: neurostars.org/t/spinal-cord…

Spinal Cord Toolbox (SCT) - New release v6.3

Dear neuroimaging community, We are happy to announce the release of SCT v6.3. The most notable changes for this release include: Feature: Add QC report for sct_deepseg. View pull request Feature:...

neurostars.org
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Interested in reproducible spinal cord quantitative MRI analysis with the Spinal Cord Toolbox? Check out this latest publication 👇 doi.org/10.2463/mrms.rev.202…
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We are happy to announce that a new version of SCT (v6.2) has been released! 🎉 Check out our announcement on @INCForg's @neuroquestion forum: neurostars.org/t/spinal-cord…

Spinal Cord Toolbox (SCT) - New release v6.2

Dear neuroimaging community, We are happy to announce the release of SCT v6.2. The most notable changes for this minor release include: Feature: Integrate 4 new nnUNet/MONAI models into sct_deepseg...

neurostars.org
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Excellent and challenging study looking at the CEST effect in the spinal cord. Kudos to @aliciacronin96 and colleagues, and thank you for using and citing #SpinalCordToolbox ❤️
Alicia Cronin@aliciacronin96
23 Jan 2024
Check out our latest work that evaluates reproducibility of 3D CEST MRI in the cervical spinal cord! dx.doi.org/10.1002/nbm.5103
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We are happy to announce that a new version of SCT (v6.1) has been released! 🎉 Check out our announcement on @INCForg's @neuroquestion forum: neurostars.org/t/spinal-cord…
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We are happy to announce that a new version of SCT (v6.0) has been released! 🎉 Check out our announcement on @INCForg's @neuroquestion forum: neurostars.org/t/spinal-cord…

Spinal Cord Toolbox (SCT) - New release v6.0

Dear neuroimaging community, We are happy to announce the release of SCT v6.0. This major release provides significant improvements for how SCT is installed on all platforms, as well as many new...

neurostars.org
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Don't miss @SandBedard @ValosekJan @naga_karthik7 and others from @PolyNeuro work on building an AI-based contrast-agnostic segmentation for the spinal cord, soon available in #SpinalCordToolbox 🚀
NeuroPoly@PolyNeuro
8 Jun 2023
Sandrine Bédard (@SandBedard), a master’s student at @PolyNeuro @polymtl, will present her work spinal cord segmentation using a #deeplearning implementation that performs well independently of the type of MRI image contrast at the @ISMRM conference this Thursday. #ISMRM #ISMRM23
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✍️ Mark your calendar! Exciting events to come: Nov 14-16: Spinal Cord Workshop (hybrid) organized by Martinos center (@Researcher_Rob): spinalcordmri.org/2023/11/14… Nov 20-21: SCT course (online, and free!). More info to come 😊

Martinos Spinal Cord Workshop (hybrid)

This website aims at bringing closer the spinal cord MRI community, which includes clinicians, physicists and computer scientists. It provides a forum, workshop announcements (including material),...

spinalcordmri.org
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We are happy to announce that a new version of SCT (v5.8) has been released! 🎉 Check out our announcement on @INCForg's @neuroquestion forum: neurostars.org/t/spinal-cord…

Spinal Cord Toolbox (SCT) - New release v5.8

Dear neuroimaging community, We are happy to announce the release of SCT v5.8. The most notable changes for this release include: Feature: sct_image: Add new -stitch option for combining sequential...

neurostars.org
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Spinal Cord Toolbox (SCT) retweeted
Julien Cohen-Adad@jcohenadad
9 Aug 2022
Bringing spinal fMRI one step closer to routine use. Great contribution @MerveKapta and colleagues 👏 and thank you for using @SpinalToolbox ❤️
This tweet is unavailable
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We are happy to announce that a new version of SCT (v5.7) has been released! 🎉 Check out our announcement on SCT's forum: forum.spinalcordmri.org/t/ne…

➤ New release: SCT v5.7

Dear SCT users, We are happy to announce the release of SCT v5.7. 🎉 The most notable changes for this minor release include: SCT can now do multimodal registration using deep learning methods. This...

forum.spinalcordmri.org
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Spinal Cord Toolbox (SCT) retweeted
Julien Cohen-Adad@jcohenadad
22 Jun 2022
This article is the culmination of a 5-year process of gathering multi-center data (made publicly available) and providing a transparent and reproducible analysis pipeline. I hope it will be useful for the community of spinal cord gray matter imagers ❤️ onlinelibrary.wiley.com/doi/…
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Application of Neurite Orientation Dispersion and Density Imaging to Evaluate and Predict the Surgical Outcome for Degenerative Cervical Myelopathy onlinelibrary.wiley.com/doi/…

Application of Neurite Orientation Dispersion and Density Imaging to Evaluate and Predict the...

The preoperative NODDI metrics at the C2 level help to evaluate the severity of spinal cord dysfunction and predict the surgical outcome. A longitudinal comparison of the preoperative and follow-up...

onlinelibrary.wiley.com
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Spinal Cord Toolbox (SCT) retweeted
Paul Thompson
@PTenigma
17 May 2022
Can you assess SPINAL CORD integrity on brain MRI? Spinal MRI metrics correlate well (R~0.4) with disease severity in Friedrich's ataxia - all automated here w/ the new ENIGMA Spinal Cord Toolbox ! Kudos @ihharding Thiago Rezende, Marcondes França Team :) medrxiv.org/content/10.1101/…
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