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Bioinformatics Blogs @bioinfblogs

A feed of articles from bioinformatics blogs selected by @theodorepak

Joined January 2013
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.@PacBio: Sequencing 101: Sequencing coverage ift.tt/eJ5jXnp

Sequencing 101: Sequencing coverage - PacBio

Explore key concepts in sequencing coverage and see how PacBio long reads may redefine how much coverage is necessary for impactful research.

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.@OmicsOmicsBlog: Called Back To London Again ift.tt/FZjyhPs
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.@cureffi: Duration of prodrome and of disease ift.tt/6vYIy0F
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.@cureffi: ASOs at single cell resolution ift.tt/YnDpbM4
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.@PacBio: HiFi whole genomes could one day replace short-read genome and exome sequencing ift.tt/UYZA36w

HiFi whole genomes could one day replace short-read genome and exome sequencing - PacBio

PacBio whole genome sequencing now has the potential to begin upending the decade-long dominance of short-reads in genomic medicine.

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.@PacBio: The HiFi difference – a better cell atlas with full-length isoform sequencing ift.tt/lhWxIfv

The HiFi difference – a better cell atlas with full-length isoform sequencing - PacBio

Researchers have created a novel cell-specific atlas of gene isoform expression that reshapes our understanding of brain development.

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.@cureffi: Tofersen is now the closest thing so far ift.tt/zTPbs58
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.@PacBio: Earth Day 2023: Can microbial communities turn plastic waste into sustainable food? ift.tt/FWdOAai

Earth Day 2023: Can microbial communities turn plastic waste into sustainable food? - PacBio

Scientists at Michigan Technological University are looking to bacteria to aid in the fight against plastic waste and food insecurity.

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.@PacBio: VAMOS! Discover hidden VNTRs with long reads ift.tt/NabmDc5

VAMOS! Discover hidden VNTRs with long reads - PacBio

See how USC scientists created a new method to characterize human VNTR variation with PacBio long-read sequencing.

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.@PacBio: HiFi metagenomics sees performance enhancements across the board ift.tt/lLXW3bQ

HiFi metagenomics sees performance enhancements across the board - PacBio

Long-read metagenomcis on the Revio system enables researchers to access to more high-quality and complete microbial data than ever before.

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.@PacBio: The power of accurate long-read RNA sequencing for fusion gene detection in cancer research ift.tt/6fyod85

The power of accurate long-read RNA sequencing for fusion gene detection in cancer research - PacBio

A new software tool for detecting gene fusions and other transcriptional abnormalities with PacBio long-read sequencing has arrived...

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.@PacBio: Long-read sequencing: the key to a more complete cancer transcriptome ift.tt/G5mtfMa

Long-read sequencing: the key to a more complete cancer transcriptome - PacBio

Accurate long-read sequencing can offer new potential clues into how to detect, track and treat various forms of cancer.

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.@PacBio: Scaling long-read sequencing throughput and accessibility with deep learning and NVIDIA ift.tt/drCNQM1

Scaling long-read sequencing throughput and accessibility with deep learning and NVIDIA - PacBio

With the launch of Revio, PacBio brings a host of technologies together to increase scale for HiFi long-read sequencing, by increasing throughput and lowering costs per gigabase of output.

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.@OmicsOmicsBlog: Thoughts on Unexpected Sequences Found In COVID mRNA Vaccines ift.tt/hgFm1ru
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.@PacBio: Introducing HiFiCNV – copy number calling optimized for HiFi reads  ift.tt/s948iXx

Introducing HiFiCNV – copy number calling optimized for HiFi reads  - PacBio

Get more from your HiFi reads with HiFiCNV a powerful new software tool for capturing large copy number variants throughout the genome.

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.@PacBio: Shining a light on dark genes ift.tt/GVbt6fw

Shining a light on dark genes - PacBio

New panel from Twist Biosciences will allow researchers to consolidate all the hard-to-sequence genes in a single, cost-effective, long-read targeted assay.

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.@PacBio: Sequencing 101: long-read sequencing ift.tt/vH9Jlx1

Sequencing 101: long-read sequencing - PacBio

In this article get an introductory overview of what long-read sequencing is and explore the advantages, applications, and benefits of using it in your research.

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.@PacBio: A sound approach to rare disease research: a day in the life of Dr. Eliot Shearer ift.tt/pBJWNL1

A sound approach to rare disease research: a day in the life of Dr. Eliot Shearer - PacBio

Rare disease research is incredibly important, improving lives and advancing our understanding of human biology. See how one rare disease researcher is making a difference.

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.@PacBio: Understanding rare diseases: why research matters ift.tt/EohpmNw

Understanding rare diseases: why research matters - PacBio

Anyone can be affected by rare diseases, regardless of their age or ethnicity and every day, researchers are working tirelessly to better understand these diseases and find treatments that can...

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.@OmicsOmicsBlog: Is Illumina Delivering the MVP of Long Reads? ift.tt/twBEWd3
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