Making sense from genomics data, he/him
Joined January 2015
- Tweets 1,094
- Following 1,425
- Followers 287
- Likes 2,194
10 Photos and videos
chuck_pr retweeted
6 Apr 2023
If you're interested in what we're building, please help us get to 200 stars on GitHub!
github.com/hex-inc/vegafusio…
ALT GitHub star counter showing 187 stars
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chuck_pr retweeted
5 Apr 2023
Our new course, "From Deep Learning Foundations to Stable Diffusion", is finally done after 8 months of work!!!
With >30 hours of video content (all free, no ads!), you'll learn how to create and train a Stable Diffusion model starting from pure Python 🧵
fast.ai/posts/part2-2023.htm…
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chuck_pr retweeted
5 Jan 2022
🟨🟧🟥🟦
It's happening: I'm writing a *book* on how to use colors in #dataviz 📊!
And you can follow along: Every day, I write an update on my progress – papers I read, color tools I find, questions I have, and people I talk to. Find all updates here: datawrapper.notion.site/Colo…
ALT screenshot of the website where I post my color book updates
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chuck_pr retweeted
2 May 2021
exciting announcement: I just put all of my comics online at wizardzines.com/comics/!
Here's a blog post about why I did it: jvns.ca/blog/2021/05/02/publ…
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chuck_pr retweeted
13 Jul 2021
Next Tuesday, July 20: Dr. Chuck Pepe-Ranney (@chuck_pr ) speaks on Microbiome Data Science. Join us! meetup.com/Research-Triangle…
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chuck_pr retweeted
1 Apr 2021
Our preprint of work led by @JamieWoolet on the effects of short-interval reburns on soil bacteria in the boreal forest with @EllWhitman, Marc-André Parisien, Dan K. Thompson, and @mikeflannigan is posted at bioRxiv
1 Apr 2021
Short-interval reburns in the boreal forest alter soil bacterial communities, reflecting increased pH and poor conifer seedling establishment biorxiv.org/cgi/content/shor… #bioRxiv
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chuck_pr retweeted
The Department of Soil Science is very pleased to announce that Dr. Thea Whitman has been tenured, a great milestone for a great scientist. We are proud to have you in our department Thea!
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chuck_pr retweeted
16 Dec 2020
my new zine "Bite Size Bash" is out now! You can get it here for $12: wizardzines.com/zines/bite-s…
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chuck_pr retweeted
9 Nov 2020
I'm happy to announce a new version of patchwork has landed on CRAN. Read all about the new features here: data-imaginist.com/2020/inse…
#rstats
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chuck_pr retweeted
26 Oct 2020
Want to learn Bayesian stats but don't know where to start? Raffling 3 tickets to PyMCon for anyone that likes or RTs (one entry per!) by 9pm PST wed. Conference funds aid development for @pymc_devs and @NumFOCUS . Plz consider donating directly as well! pymcon.com
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chuck_pr retweeted
8 Oct 2020
One year later and 110 million jobs run, a new Nextflow Tower release is out! Now including workflow sharing and support for HPC schedulers! 🎉🎉🚀🚀
seqera.io/blog/sharing-is-ca…
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chuck_pr retweeted
23 Sep 2020
New paper accepted! Turns out sea star densoviruses are pretty common and probably not associated with sea star wasting disease. (I apologize for the formatting and likely grammatical mistakes. Needs proofs)
@fieldomics @rabbleroyal @IanH77 @SeaDocSociety jvi.asm.org/content/early/20…
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chuck_pr retweeted
15 Sep 2020
If you request absentee ballot in NC, you can track status online with northcarolina.ballottrax.net…. Super easy. My vote already counted 🇺🇸
The deadline to request a ballot by mail in NC is (received by) Tuesday, October 27, 2020
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Thanks @jlengstorf for teaching me how to make social media images for blog posts! chuckpr.github.io/posts/five…
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chuck_pr retweeted
11 Aug 2020
Hi all -- I'm presenting on "Model misspecification in microbiome data analysis" in the NW Data Science Seminar Series this Wednesday -- registration is free and quick -- looking forward to answering questions live then!
The next Northwest Data Science Seminar is this Wed @ 3:00PM. Featuring Drs. @AmyDWillis (@UW) and Ben Bloem-Reddy (@UBC). They'll be speaking on #microbiome, #MachineLearning and network models.
Free to attend: conference.dsi.ubc.ca/
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chuck_pr retweeted
7 Aug 2020
biorxiv.org/content/10.1101/… New preprint out today on sea star densoviruses with @IanH77 @hllutz @rabbleroyal and others. Huge thx to the many people that collected samples used in this study.
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chuck_pr retweeted
12 May 2020
Our report on long-term COVID recoveries is live: bit.ly/bp-covid-survey-analy…
I'm damn proud of this work. We made this with covid brains, dealing with fevers & fatigue, between trips to urgent care & doctors. We learned things we haven't seen in the news yet. Please share!
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chuck_pr retweeted
20 Apr 2020
🎊NEW!🎊
We made a game to show how an infectious disease might spread in your community, using data from your zip code & your decisions whether to #stayhome each week. And what might happen if you go back to normal after 8 weeks.
Try w/ your zip code → peopleofthepandemicgame.com/
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chuck_pr retweeted
22 Apr 2020
Despite the importance of sweet potato, little is known about the sweet potato microbiome. @agbiome researchers sought to better understand the sweet potato microbiomes by characterizing it within and between actual working farms. @chuck_pr
apsjournals.apsnet.org/doi/1…
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