Sequence-to-sequence translation from mass spectra to peptides with a transformer model

A fundamental challenge for any mass spectrometry-based proteomics experiment is the identification of the peptide that generated each acquired tandem mass spectrum. Although approaches that leverage...

Semi-supervised Single-Cell Cross-modality Translation Using Polarbear

The emergence of single-cell co-assays enables us to learn to translate between single-cell modalities, potentially offering valuable insights from datasets where only one modality is available....

De novo mass spectrometry peptide sequencing with a transformer model

Tandem mass spectrometry is the only high-throughput method for analyzing the protein content of complex biological samples and is thus the primary technology driving the growth of the field of...

Postdoctoral Career Development Awards