Anantharaman Microbiome Lab @UWMadison. Microbial/Viral ecology, omics, biogeochemistry with a focus on sulfur metabolism in environmental and human microbiomes
Joined September 2017
- Tweets 65
- Following 82
- Followers 772
- Likes 90
3 Photos and videos
The Anantharaman Lab retweeted
19 Aug 2022
Congrats 🎉 to our student @patriciatran_ for winning an #ISME18 best poster award! Woot woot. @quendi @UWBact @AnantharamanLab
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The Anantharaman Lab retweeted
8 Aug 2022
Excited to showcase our new @AnantharamanLab paper co-led by @ZhichaoZhou_CHN and Emily St. John focused on the microbial ecology of globally distributed deep sea hydrothermal vent chimneys. Super collaboration with @alr_thermophile. biorxiv.org/content/10.1101/….
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The Anantharaman Lab retweeted
9 Jun 2022
Honored to receive the ASM Early Career Award for Environmental Research. And more so, Super honored to be receiving this with @Firestone_Lab. @UWBact @AnantharamanLab
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The Anantharaman Lab retweeted
25 May 2022
Proud advisor moment! Sad to see my first PhD student @KrisKieft leave. But onto a fantastic future career ahead! Congratulations Kris on a fabulous PhD. The @AnantharamanLab was truly honored to have you be a part of our family and will miss you.
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The Anantharaman Lab retweeted
11 May 2022
Interested in viromics or viruses in microbiomes? Our new manuscript describing the virus binner vRhyme is out! Led by @AnantharamanLab PhD student @KrisKieft in collaboration with @lindskalan @SalamMicrobes @TeemoDoScience @UWBact @UWMadisonMDTP academic.oup.com/nar/advance…
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The Anantharaman Lab retweeted
19 Apr 2022
New @AnantharamanLab paper describing sulfur metabolism in #colorectalcancer #microbiome is out! Led by MD-PhD student Elise Cowley through a fantastic collaboration w/ Patricia Wolf, Rex Gaskins, and @Ridlon_Lab. @UWMadisonMDTP @UWBact microbiomejournal.biomedcent…
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The Anantharaman Lab retweeted
24 Mar 2022
Our new paper describing PropagAtE - our software for prophage activity estimation is out! Use this to study the ecology of prophages in genomes/metagenomes in diverse ecosystems and microbiomes. @KrisKieft @AnantharamanLab @UWMadisonMDTP @UWBact journals.asm.org/doi/10.1128…
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The Anantharaman Lab retweeted
25 Feb 2022
METABOLIC is a novel scalable software by @AnantharamanLab which allows for characterization of microbial metabolic predictions, exchanges & interactions, individual contributions to biogeochemical cycling & community-scale functional network construction microbiomejournal.biomedcent…
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The Anantharaman Lab retweeted
16 Feb 2022
Super excited to pass along this awesome work! @patriciatran_ @AnantharamanLab Do you like microbial genomes and bio geochemistry??? Look no further microbiomejournal.biomedcent…
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The Anantharaman Lab retweeted
16 Feb 2022
Our paper describing the software METABOLIC is out. We've got some great analyses and visualizations for microbial metabolism, pathways, metabolic interactions, and biogeochemical cycles from microbial genomes and metagenomes. @AnantharamanLab @UWBact microbiomejournal.biomedcent…
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The Anantharaman Lab retweeted
If you're interested in viral genomics, this new review by #MDTP student @KrisKieft is for you!
@UWBact @AnantharamanLab
17 Jan 2022
Our new review on the state of viral/phage genomics led by super-talented Ph.D student @KrisKieft is now out! We discuss conventions, biases, ideologies, and the future of virus genomics. @AnantharamanLab @UWBact sciencedirect.com/science/ar…
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The Anantharaman Lab retweeted
17 Jan 2022
Our new review on the state of viral/phage genomics led by super-talented Ph.D student @KrisKieft is now out! We discuss conventions, biases, ideologies, and the future of virus genomics. @AnantharamanLab @UWBact sciencedirect.com/science/ar…
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The Anantharaman Lab retweeted
Want to bin virus genomes from metagenomes?
Then #MDTP student @KrisKieft has the right tool for you!
Congrats to Kris, current student @salamzader, and trainers @lindskalan @KarthikGeomicro on their preprint!
biorxiv.org/content/10.1101/…
@UWBact @AnantharamanLab @madmicrobiome
21 Dec 2021
vRhyme is available for download on GitHub github.com/AnantharamanLab/v…
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The Anantharaman Lab retweeted
21 Dec 2021
Why is there a Pseudomonas when there is no Realmonas?
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The Anantharaman Lab retweeted
21 Dec 2021
Excited to share ‘vRhyme’, a new bioinformatics tool for binning viruses and phages into viral metagenome-assembled genomes (vMAGs)! @AnantharamanLab @UWMadisonMDTP @UWBact doi.org/10.1101/2021.12.16.4…
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The Anantharaman Lab retweeted
20 Dec 2021
Our viral genome binner "vRhyme" is available on github. All feedback/comments welcome. @KrisKieft github.com/AnantharamanLab/v…
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The Anantharaman Lab retweeted
20 Dec 2021
Interested in viruses/phage and metagenomics? Check out our new manuscript led by @KrisKieft describing vRhyme, a software to reconstruct viral genomes from metagenomes! @AnantharamanLab @UWMadisonMDTP @UWBact biorxiv.org/content/10.1101/…
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The Anantharaman Lab retweeted
10 Dec 2021
The Anantharaman lab is looking for a postdoc to work on developing and applying approaches to study the diversity, ecology, and/or evolution of viruses/phage in the environment. Please RT and spread the word. @UWBact @UWMadisonCALS @AnantharamanLab anantharamanlab.wisc.edu/202…
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The Anantharaman Lab retweeted
#MDTP Student Highlight: Kris Kieft
@KrisKieft is a 5th year student in the @AnantharamanLab who uses metagenomic sequencing data to study viruses in nature and how they impact microbial metabolism.
#UWMadison #LoveVirology
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The Anantharaman Lab retweeted
23 Nov 2021
Awesome article in our student newspaper @BadgerHerald on our research on Sulfur Cycling in freshwater lakes spearheaded by Ph.D student @patriciatran_ and her mentee, undergraduate researcher Samantha Bachand. badgerherald.com/news/2021/1… @AnantharamanLab @UWBact
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