Group leader at MIMS, Sweden. Developing #multiomics / #systemsbiology approaches to understand #Tcells. #immunology #machinelearning @NordicEMBL
Joined February 2014
- Tweets 83
- Following 1,063
- Followers 485
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Pinned Tweet
26 Mar 2023
We can now infer #chromatin #condensation at the #singlecell level! Applied this to new #Bcell #multiome atlas, found out how #AID can avoid #cancer during #somatichypermutation biorxiv.org/content/10.1101/…
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Johan Henriksson retweeted
10 Jan 2023
Here are my 12 guidelines for data exploration and analysis with the right attitude for discovery:
1. You never really finish analyzing a dataset. You just decide to stop and move on at some point, leaving some things undiscovered. 🧵
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Johan Henriksson retweeted
Researchers from @umeauniversity, in collaboration with international colleagues, established G-protein coupled receptors and neuropeptide mutant libraries of C. elegans using CRISPR/Cas9-based approaches. A powerful resource for screening, now published in @NatureComms.
ALT Schematic drawing of our approach to phenotypic profiling of nearly all GPCR genes in C. elegans.
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3 Jun 2023
Like hacking on new #technology? #interdisciplinary #postdoc position available in developing a new #microfluidics method for high-throughput #singlecell #wholegenomesequencing of #bacteria henlab.org/postdoc-resolving…
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26 Mar 2023
We can now infer #chromatin #condensation at the #singlecell level! Applied this to new #Bcell #multiome atlas, found out how #AID can avoid #cancer during #somatichypermutation biorxiv.org/content/10.1101/…
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26 Mar 2023
#Lymphoma through random #mutagenesis avoided by #condensation, driven putatively by somewhat poorly studied #CDK13
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26 Mar 2023
Also, we found that #atypical #monocytes are locked in a special #cellcycle stage by CDKN1C; regular #singlecell #RNAseq based cell cycle annotation missed this. #ATACseq is a very useful complement!
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Johan Henriksson retweeted
12 Aug 2022
Seeking #postdocjobs - we want you! The IceLab #multidisciplinary postdoctoral fellowships are accepting applications now. You should have math & #computational modeling skills & a deep interest in working with empirical researchers. Welcome to IceLab! icelab.se/opportunities/mult…
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Johan Henriksson retweeted
3 Jun 2021
We wish to recruit a #phd or #postdoc for #bioinformatics methods development, #singlecell and #crispr on #CAR #Tcell. #python, #bayesianstatistics, #ml helpful! henlab.org
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18 Jan 2020
Congrats to our first 4 students passing their project course, #modelling #transcriptionfactors & #RBPs using #Tcell #RNAseq data!
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18 Jan 2020
Don't forget the most important thing of them all: color figures!
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Johan Henriksson retweeted
17 Jan 2020
T cell metabolism: new insights in systemic lupus erythematosus pathogenesis and therapy nature.com/articles/s41584-0…
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18 Jan 2020
CyTOF against 110 metabolite transporters and enzymes in immune cells
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Johan Henriksson retweeted
12 Jan 2020
Wetlab #postdoc position in #Tcell #systemsbiology available @NordicEMBL. Come help us reinvent #immunology! bit.ly/2TnDPHz |
@humanimmunenews @ImmunologyNews @CdnImmunol @britsocimm @Immunopaedia @ASImmunology @sangerinstitute @embl @maxplanckphdnet
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Johan Henriksson retweeted
8 Jan 2020
Our latest work on transcription factors showing mechanistic insights into how they cooperate and its functional impact - great collaboration with Janosch Hennig's group at @embl who experimentally validated our predictions. Thanks Jussi Taipale for generating this great dataset!
8 Jan 2020
Our work on the mechanisms of transcription factor (TF) cooperativity and its usage for the discovery of TF-phenotype associations is out!
nature.com/articles/s41467-0…
@zauggj, @BrittaVelten, @BKlausStats, @NatureComms @embl (1/8)
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Johan Henriksson retweeted
Including 1 PhD position in my group @ICBmunich @epigeneticsHMGU @HelmholtzMunich, co-supervised at @siegel_lab, working with scRNA-seq and scATAC-seq data to study what makes pathogens successful (method development mathematical modeling). Please apply before 15 February! Pls RT
24 Dec 2019
15 PhD positions in chromatin heterogeneity, single-cell technology and infection biology available within the MSCA ITN Cell2Cell euraxess.ec.europa.eu/jobs/4…
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