The first AI-based study from my lab. I am actively learning how to use attention matrices in research, and more is to come. A big shout-out to the fabulous Yang Zhang from my lab.
biorxiv.org/content/10.64898…
Read our latest rdcu.be/dNPbB on a new single-step Single-Cell Total-RNA-seq method: SnapTotal-seq and its applications in identifying regulatory hubs of TFs, published with @SpringerNature in @NatureComms. So proud of two fabulous students: Yichi Niu & Jiayi Luo.
Ever since our discovery of multi-receptor expression in the developing nose in 2015 @MolSystBiol and solving their 3D genome structure in 2019 @NatureSMB, it has been my dream to measure them (RNA Hi-C) from the same cell. We finally did it! Thank you @Wu_Honggui for hard work
I'm thrilled to introduce our latest technique—LiMCA (Linking mRNA to Chromatin Architecture (LiMCA)), from Sunney's lab @XieSunney, which simultaneously profiles 3D genome and transcriptome with the same cell. Preprint: researchsquare.com/article/r…
Congratulations to Dr. Gibbs @BCM_HGSC, Dr. Doddapeneni, Dr. Rui Chen, Dr. Sedlazeck @sedlazeck and Dr. Zong @Zonglab on your funding to study somatic mosaicism and its full impact on human health!
Our paper on high-throughput transcriptome profiling of individual synapses is online. Congratulations to all the students and postdocs contributing to this work. Cannot express enough gratitude to Dr. David Weitz and Dr. Hui Zheng for their gracious support throughout this work.
Single-cell Damagenome Profiling by Linear Copying and Splitting based Whole Genome Amplification (LCS-WGA) —BIO-PROTOCOL en.bio-protocol.org/e4357#.Y…
Very proud of my team, special thanks to the two co-first authors: Qiangyuan (now with his own lab at Zhejiang U) and Yichi. This work will have far-reaching impacts on human disease. You can count on my words. advances.sciencemag.org/cont…
doi.org/10.7554/eLife.64204@eLife
The first mouse model work from my lab. It combines transcriptome profiling of individual early neoplastic lesions and SWI/SNF complex related mechanistic study in pancreatic cancer. Congrats to all who contributed to the work.
Please retweet! Check out jobrxiv.org, the job board for scientists, by scientists: Thousands of jobs from academia and industry, free job postings and candidates from over 160 countries @jobRxiv
cell.com/cell-reports/fullte…
Another good example of MATQ-seq in detecting subtle heterogeneity among the apparently homogeneous cells.
Kudos to Neus, Priyam, Yichi, and Wenjian for deliverying it.
New Article online now at Cell: Potent neutralizing antibodies against SARS-CoV-2 identified by high-throughput single-cell sequencing of convalescent patients’ B cells zpr.io/tvueJ
Longzhi Tan has been named the 2019 Grand Prize winner of the Science & @SciLifeLabPrize for Young Scientists for his work in developing an approach that allows us to visualize our genome’s three-dimensional structure. fcld.ly/tkjhvo6
Super-resolution imaging of transcripts from 10,000 genes in single cells—a >10-fold improvement over current methods #NBThighlightgo.nature.com/2U2B4N7