Senior Scientist @berkeleylab, Adj. Faculty @Berkeley_EECS. Parallel computing, sparse matrices, graphs. #firstgen #immigrant. PI of passion.lbl.gov
Joined March 2011
- Tweets 3,006
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- Followers 977
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121 Photos and videos
10 Jan 2025
Only 4 wholesome ingredients?
28 Dec 2024
Damn. I just threw away a whole stash of RxBars after reviewing plasticlist.org/
“In modern foods, the RXBAR had the highest DEHP level with 31,200 ng/serving, followed by Sweetgreen with 30,415 ng/serving.”
Also, Sweetgreen, smh. 🤦♂️
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5 Dec 2024
Berkeley PD @berkeleypolice what is the point of blocking University exit and having cars trapped in the highway in tsunami time? People are trying to get to higher elevation by getting off the highway and you are putting people’s lives in danger @BerkeleyScanner @berkeleyside
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10 Nov 2024
After eight years of solo effort on the Circle compiler, it's time to go back on the job market. I'm looking for a new challenge.
I'd prefer in-office work in NYC. If you know of a good career opportunity for a very productive programmer, DM or email me.
circle-lang.org/resume.pdf
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28 Oct 2024
Our DOE MMICCs project Sparsitute released a few tutorials: sparsitute.lbl.gov/videos
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28 Oct 2024
Hope these two hour tutorials are useful. One is on Dynamic Low-Rank Approximation by Stefan Schnake and the other is on Persistent Homology Computation by Dmitriy Morozov.
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14 May 2024
I'm at MLSys! Come check out my talk on "Distributed Matrix-Based Sampling forGraph Neural Network Training". Excited to chat about GNNs, HPC, and machine learning systems! #MLSys2024
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24 Apr 2024
Such great news to hear about this HUGE award received by Amanda Randles
🏆Congratulations to Amanda Randles on receiving the 2023 #ACMPrize in Computing! Randles is recognized for her groundbreaking contributions to computational health through innovative algorithms, tools, and high-performance computing methods. Learn more: bit.ly/43oBu0D
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7 Mar 2024
Congratulations again Prof. Giulia Guidi @giuliaguidi for the award and the excellent talk. Hopefully the @siag_sc folks follow the research opportunities in biology for parallel processing.
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15 Dec 2023
I am honored to receive this award and I would like to thank all those who have contributed their time, effort and enthusiasm to support my work, especially @aydoz and @KathyYelick.
Thank you, @CornellCIS, for the amazing support I have received in my first year as a faculty!
15 Dec 2023
Congrats to @GiuliaGuidi, assistant professor of computer science at @CornellCIS, on winning the SIAM 2024 Supercomputing Early Career Prize! 👏👏
Guidi was selected for her “pioneering works bridging high-performance computing and computational biology." cis.cornell.edu/guidi-receiv…
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2 Dec 2023
Veteran reporter Emilie Raguso @emraguso of @BerkeleyScanner was barred from a news conference hosted by @AlamedaCountyDA Pamela Price. Her office issued this statement. @DavidLoySD @FACoalition says DA runs afoul of 1st Amendment. 5,6:15 p.m. @KTVU
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29 Nov 2023
What a time to be alive.
‘Graph networks trained at scale…discover 2.2 million structures… many of which escaped previous human chemical intuition…Of these, 381,000 entries live on the updated convex hull as newly discovered materials.’
LFG
nature.com/articles/s41586-0…
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11 Oct 2023
Check it out — @JGI researchers show microbial diversity is wilder than ever!🦠@Nature's latest outlines the computational approach to unveiling protein functional diversity. (🧵) jgi.doe.gov/release-nmpfcata…
@LBNLcs @NERSC @BerkeleyLab @DOEScience @kyrpides @g_pavlopoulos @aydoz
ALT An illustration of a microscope emitting a beam of light that hits a small, nondescript item. (Samantha Trieu/Berkeley Lab)
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11 Oct 2023
We analyzed Earth's microbiome using scalable bioinformatics approaches to define the unannotated functional space and discovered thousands of new protein families and novel structures in various environments.
nature.com/articles/s41586-0…
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Personal Update: I’ve moved to @BerkeleyLab and joined the Performance and Algorithm Reserach Group as a Postdoc researcher. I will work with @aydoz on exciting Sparsitute sparsitute.lbl.gov project. Feel free to reach out for discussion and collaboration!
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22 Jul 2023
We are pleased to announce this CFP for the Workshop on Sparse Tensor Computations, to be held on October 18-19, 2023 in Chicago. Please see the workshop website for further/updated information (solomonik.cs.illinois.edu/te…) and Google form for registration (docs.google.com/forms/d/e/1F…)
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19 Jun 2023
An interesting large-scale co-assembly of soil metagenome: 8 TB of FASTQs altogether fed to an assembler, resulting in a 75 Gbp assembly. journals.asm.org/doi/pdf/10.… "Terabase-Scale Coassembly of a Tropical Soil Microbiome"
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Prestigious highly paid ($110k salary) #postdoc opportunity @BerkeleyLab for US citizens - come work with me at the intersection of nuclear chemistry, #compchem, reaction networks, and #MachineLearning! RTs appreciated! #ChemPostdoc More info: nextgen.lbl.gov
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16 Jun 2023
Yay! Our paper “Space Efficient Sequence Alignment for SRAM-Based Computing: X-Drop on the Graphcore IPU” has been accepted to @Supercomputing 2023💥
📄 preprint: arxiv.org/abs/2304.08662
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3 Jun 2023
After Moore’s law what will come next?
Cleve Moler’s law: the number of people believing Moore’s Law is dead doubles every year. Cleve said this to confirm that we should be curious about what comes next.
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3 Jun 2023
That @IPDPS paper (that John marked up 5 times before submission as it was my first paper as a fresh graduate student who did not know how to write): people.eecs.berkeley.edu/~ay…
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