Joined July 2012
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20 Oct 2025
If you need more exciting news about Denisovans, check out our paper on Denisovan ancestry in modern humans through time, out today in Current Biology: cell.com/current-biology/ful…! #Denisovan #ancientDNA
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20 Oct 2025
The most surprising insight is that the Jomon, early inhabitants of the Japanese Archipelago, have much less Denisovan ancestry than all other East Asians - thus the Jomon (partially) descend from a lineage that predates the gene flow between modern-humans and Denisovans
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20 Oct 2025
Also check out the dispatch by Shigeki Nakagome: cell.com/current-biology/ful…, and (of course) our new preprint on the genome of a 200,000 year old Denisovan biorxiv.org/content/10.1101/…
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Benjamin Peter retweeted
12 Dec 2024
This is a really cool study and I'm glad to see it come out!
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Benjamin Peter retweeted
12 Dec 2024
My summary of the new papers about Neanderthal interbreeding
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12 Dec 2024
The first paper is a systematic survey of Neandertal ancestry through time; a joint effort with @moorjani_priya ’s lab at UC Berkeley, co-led by @IasiLeonardo and @M_Chintalapati. Leo has a great summary of our main findings here:
12 Dec 2024
Out today in @sciencemagazine, we've journeyed into our shared history with Neandertals by analyzing over 300 present-day and ancient modern humans, including 59 individuals who lived between 2,000 and 45,000 years ago.
science.org/doi/10.1126/scie…
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12 Dec 2024
Today is a very big day for our research group, with two of my students, @arevsumer and @IasiLeonardo publishing papers on the same day! science.org/doi/10.1126/scie… nature.com/articles/s41586-0… #Neanderthals #Geneflow
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Benjamin Peter retweeted
14 May 2024
9) We searched for candidates of adaptive selection using an outlier approach. We found that many previously published candidate regions related to skin pigmentation, metabolism, and immunity were immediately selected, with some regions becoming adaptive at a later stages.
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Benjamin Peter retweeted
14 May 2024
8) We examined the distribution of Neandertal ancestry over time and found that the ancestry landscape, including the Neandertal deserts, were formed quickly after the gene flow supporting theoretical predictions. We infer the initial Neandertal gene flow may have been >5%.
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Benjamin Peter retweeted
14 May 2024
7) Our data supports a single extended pulse of Neandertal gene flow that took place around 47,000 years ago, with a duration of around 6,000 years.
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Benjamin Peter retweeted
14 May 2024
6) Digging deeper, we infer the timing of Neandertal gene flow per individual by studying the ancestry covariance across the genome.
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Benjamin Peter retweeted
14 May 2024
5) The Early out of Africa individuals including Oase1, Ust’ Ishim and the Bacho Kiros have the highest unique Neandertal ancestry and significantly different matching profile to sequenced Neandertals than later modern humans- a possible indication of diversified gene flow.
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Benjamin Peter retweeted
14 May 2024
4) By exploring the colocalization of Neandertal ancestry segments and contrasting it to genome-wide allele sharing, we uncovered that most (>90%) Neandertal ancestry is shared among individuals and follows the overall population structure.
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Benjamin Peter retweeted
14 May 2024
3) We inferred Neandertal segments in the individuals using admixfrog (github.com/BenjaminPeter/adm…), and used the ancestry covariance for dating (github.com/MoorjaniLab/Proba…).
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Benjamin Peter retweeted
14 May 2024
2) We use genomic data from 59 ancient modern human individuals ranging between 45,000–2,200 yBP with 275 diverse present-day individuals from worldwide populations forming 16 clusters for our analysis.
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Benjamin Peter retweeted
14 May 2024
1) Previous studies characterized the Neandertal ancestry segments in present-day populations and found a non-homogeneous distribution. But how did this distribution look like in the past?
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Benjamin Peter retweeted
14 May 2024
In a collaboration between @M_Chintalapati ,@SkovLaurits , Alba Bosoms Mesa, @MatejaHajdi , @benmpeter and @moorjani_priya , we've journeyed into our shared history with Neandertals by analyzing over 300 genomes spanning 50,000 years. A thread 🧵🧬
biorxiv.org/content/10.1101/…
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Benjamin Peter retweeted
8 May 2023
Come join us at @MPI_EVA_Leipzig! The Dept of Primate Behavior & Evolution is looking for a lab manager/coordinator to integrate our molecular genetic, cell culture, and field-based labwork. Details here: tinyurl.com/2p83xj4p
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Benjamin Peter retweeted
9 Mar 2023
Newly published paper by myself and @LoganCorina, @DieterLukas, and @popgenchen on the range expansion of the great-tailed grackle, and range stability of the boat-tailed grackle! peercommunityjournal.org/art…
#TheGrackleProject
@PeerComJournal
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