Joined May 2019
- Tweets 39
- Following 13
- Followers 259
- Likes 1
2 Photos and videos
cengenproject retweeted
8 Mar 2023
It was great to meet everyone involved in the @cengenproject yesterday! Photo by @xenopuselegans. Bonus: photo op with the Columbia bio dept gorilla 🦍. @barrett_alec @KrishnaswamyLab @AlexisWe @wormdoc1 @sethrtaylor @latinodeciencia @betenoire1 @AardvarkMarc
2
2
18
2,087
cengenproject retweeted
1 Nov 2022
Finally out! Proud to present the collaborative effort where we systematically mapped neuropeptide-GPCR interactions biochemically (doi.org/10.1101/2022.10.30.5…) and constructed an in silico map of neuropeptide signaling in the worm brain doi.org/10.1101/2022.10.30.5…
4
25
77
cengenproject retweeted
31 Oct 2022
The neuropeptidergic connectome of C. elegans biorxiv.org/cgi/content/shor… #bioRxiv
3
5
cengenproject retweeted
20 Oct 2022
New tool available: you can now look at alternative splicing in many neuron types of the worm brain! Access it at splicing.cengen.org (1/7)
2
13
33
20 Oct 2022
New tool available: you can now look at alternative splicing in many neuron types of the worm brain! Access it at splicing.cengen.org (1/7)
2
13
33
20 Oct 2022
The event-level quantification, while harder to interpret, allows you to find interesting events across all neurons. The genome browser view gives direct access to the raw data and can help contextualize the results of the other tools. 6/7
1
1
20 Oct 2022
See the documentation at splicing.cengen.org for details on what the tools are showing. Please note that this data and tools are a work in progress, we are developing various ways to improve cleaning and validation. Feel free to contact us for questions or suggestions! 7/7
1
cengenproject retweeted
26 Sep 2022
Tired of seeing these "Disconnected from the server. Reload" error messages? We updated the CeNGEN scRNA-Seq app! (1/6)
1
3
12
26 Sep 2022
Tired of seeing these "Disconnected from the server. Reload" error messages? We updated the CeNGEN scRNA-Seq app! (1/6)
1
3
12
26 Sep 2022
The new App is available at the previous URL (cengen.shinyapps.io/cengenAp…). If you want to access the old App, it is still running and available at cengen.shinyapps.io/cengenAp… (5/6)
1
26 Sep 2022
As always, the code is on Github (github.com/cengenproject/Cen…). Let us know if you still have problems, feedback, or if you need some more functionality! (6/6)
cengenproject retweeted
16 Dec 2020
Check out our new data release on the entire C. elegans nervous system!
16 Dec 2020
You can interrogate gene expression across the C. elegans nervous system at this website:
cengen.shinyapps.io/CengenAp…
Molecular topography of an entire nervous system biorxiv.org/content/10.1101/…
3
7
17 Dec 2020
1/4 We are very excited to announce a gene expression data set for every neuron type in the entire C. elegans nervous system.
3
131
467
17 Dec 2020
3/4 More key findings:
--cis-regulatory motifs for neuron-specific gene expression across the nervous system
--Cell adhesion protein genes correlated with connectivity and process placement in the nerve ring
1
1
11
17 Dec 2020
4/4 Our manuscript is available at bioRxiv biorxiv.org/content/10.1101/… and data can be explored at cengen.shinyapps.io/CengenAp….
5
32