Joined December 2015
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Mar 5
Looking for a PhD position at the intersection of AI, imaging, and gene therapy? Apply for this position in my lab: tinyurl.com/2a2v6tvx
Part of sfb1690.uni-goettingen.de/ that studies hearing, vision, and more.
Plus, you can create pretty pictures like the one below :).
ALT A cochlea imaged in light-sheet microscopy (right) with staining for spiral ganglion neurons (red) and inner hair cells (blue). You will develop AI-based methods to analyze these structures, for example via segmentation of the individual cells (right) that will support gene therapy development for hearing loss and a better overall understanding of the anatomy of hearing.
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Jun 13
Did it actually answer someone what a mitochondrion is 😱😱😱
Jun 13
The US government, citing national security authorities, has issued an export control directive to suspend all access to Fable 5 and Mythos 5 by any foreign national, whether inside or outside the United States, including foreign national Anthropic employees.
The net effect of this order is that we must abruptly disable Fable 5 and Mythos 5 for all our customers to ensure compliance.
Access to all other Claude models is not affected.
We apologize for this disruption to our customers. We believe this is a misunderstanding and are working to restore access as soon as possible.
Read our full statement: anthropic.com/news/fable-myt…
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i need someone at @OpenAI and @AnthropicAI to teach the models that while prototyping, backwards compatibility is just a bad idea
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May 20
Sorry to break the news, but the job of twitter hypeman was automated a few years ago already.
May 20
Today we all lost our jobs.....
Three Nature papers showing that scientists in the conventional sense are obsolete
At least read the first one.... the AI replaced all things that the scientist does ....
nature.com/articles/s41586-0…
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Constantin Pape retweeted
🔬 Imaging Seminar on Vision Foundation Models for Microscopy with Prof. Constantin Pape (@cppape) from University of Göttingen
📅 Mar 30, 17:00
👉 Registration: lnkd.in/ej6iCuPA
💡 EPFL PhDs:
Imaging Lunch w/ Prof. Pape
📅 Mar 31, 10:00
👉 lnkd.in/exemA5hW
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Constantin Pape retweeted
Mar 3
🚀 Today we’re releasing FlashOptim: better implementations of Adam, SGD, etc, that compute the same updates but save tons of memory. You can use it right now via `pip install flashoptim`. 🚀
arxiv.org/abs/2602.23349
A bunch of cool ideas make this possible: [1/n]
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Constantin Pape retweeted
Feb 10
I'm looking for a Swiss department to host me for an SNSF StG.
I research how gene expression evolves and emerges by combining wet lab computational work in a variety of model systems. More: timothyfuqua.com
If your department might be a match, let’s chat!
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Jan 12
Retweeting as an AC: Please sumbit your CVPR reviews ;)
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The #CVPR2026 review deadline is fast approaching: January 12, 2026.
If you face any difficulties, contact your Area Chair NOW!
Approach your reviews the way you would expect your own to be handled, and consult the reviewer guidelines here: cvpr.thecvf.com/Conferences/…
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Constantin Pape retweeted
19 Nov 2025
OK can you guys please dedicate even half the energy you collectively use critiquing Empire of AI to also critique the massive work of harmful pseudoscience by Yud and Soares that was also a NYT Bestseller
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18 Nov 2025
Preprint alert! CochleaNet, our framework for analyzing cochlear light-sheet data. It consists of three networks to segment spiral ganglion neurons, inner hair cells, and detect synapses. Rendering of a full cochlea below, find the preprint at doi.org/10.1101/2025.11.16.6…
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18 Nov 2025
We comprehensively evaluate our method and use it to analyze intact mouse and gerbil cochleae, including SGN sub-types, and to validate (opto-)genetic therapies preclinically (see screenshot). CochleaNet is also applicable to lower-resolution data from commercial systems.
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18 Nov 2025
This work was an excellent collaboration with the group of Tobias Moser, building on the cutting edge light-sheet microscopy of the Huisken lab.
Special thanks to Lennart, Aleyna, Elisabeth, and Martin! If you want to use CochleaNet, check out github.com/computational-cel…
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10 Sep 2025
Any arivis experts here that could help with opening an old .sis file? See forum.image.sc/t/opening-old…
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Constantin Pape retweeted
25 Aug 2025
We are hiring the second cohort of EvoReSt PhD students. If you are interested in deep evolutionary questions, checkout:
uni-goettingen.de/de/687607.…
Apply here:
obp.uni-goettingen.de/de-de/…
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Constantin Pape retweeted
30 Jul 2025
I just published a video showing how to use Pixi and Napari-Easy-Augment-Batch-DL for reproducible deep learning segmentation. In this example, I use Pixi to set up a Python environment then launch Napari to explore and compare Cellpose3 and Micro-SAM. youtu.be/3ObAnSTBri8
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23 Jul 2025
Looking for an opportunity to work on cutting super-resolution microscopy and AI? There's still time to apply to the two positions!
7 Jul 2025
Our goal is to develop methods to understand the dynamics of biomolecules, using the latest developments in super-resolution microscopy and AI-based image analysis. Apply here:
uni-goettingen.de/de/699491.…
uni-goettingen.de/de/699489.…
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Constantin Pape retweeted
12 Jul 2025
4th paper with my brother @AbedShaib. Second on AI. A shared path with our PhD supervisor Ute, who supervised me during my PhD & now supervises him.
Proud of this new publication in @NatureComms. A big thank u to our Editor @sgqcheng & our collaborators!
nature.com/articles/s41467-0…
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Constantin Pape retweeted
8 Jul 2025
Really excited to share this Perspective from John Danial covering how technology is moving the field of fluorescence microscopy toward structural biology. nature.com/articles/s41592-0…
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