Expert AI engineer@adahealth. Co-founder of @hp_ontology and @phenomizer - work on digital health, ML, ontology. Member of @MonarchInit.
Joined June 2015
- Tweets 676
- Following 606
- Followers 479
- Likes 1,349
21 Photos and videos
Dr. Sebastian Köhler retweeted
13 Dec 2023
Die Linse muss bleiben!
Zusammen mit @Potse_Berlin und Libero e.V. haben wir heute eine gemeinsame Pressemitteilung veröffentlicht!
13 Dec 2023
Es gibt Hoffnung! Heute am #B1312 veröffentlichen wir unsere gemeinsame Pressemitteilung mit @solinetzberlin und Libero e.V. für eine Rettung der #Linse und einer Zukunft der #Potse!
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Dr. Sebastian Köhler retweeted
16 Nov 2023
HPO goes international in our new publication «The Human Phenotype Ontology in 2024: phenotypes around the world»
academic.oup.com/nar/advance…
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6 Apr 2023
Big announcement today. @hp_ontology goes multi-lingual: groups.io/g/human-phenotype-…
Thanks to all translators, @NicoMatentzoglu, and @pnrobins
@MonarchInit
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Dr. Sebastian Köhler retweeted
3 Mar 2023
Enriching Representation Learning Using 53 Million Patient Notes through Human Phenotype Ontology Embedding biorxiv.org/content/10.1101/…
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Dr. Sebastian Köhler retweeted
22 Feb 2023
Congratulations to @ontowonka and the #N3C team for winning the Grand Prize on #DataSharing as part of the @FASEBorg DataWorks! Challenge! 🎉
And even more congratulations to @ontowonka and the @MonarchInit for winning the Distinguished Achievement Award for #DataReuse! 🎉
🎉CONGRATS to the winners of the @FASEBorg DataWorks! Prize🎉
🔁Grand Prize, Data Reuse: BrainChart — "Brain Charts for the Human Lifespan"
🤝Grand Prize, Data Sharing: N3C — "Democratizing Access to Clinical Data"
Check out the winning projects:
datascience.nih.gov/director… #NIHData
ALT Announcing FASEB DataWorks! Prize Winners
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Dr. Sebastian Köhler retweeted
13 Feb 2023
Our recent agreement with @MonarchInit to develop maps from #SNOMEDCT to @hp_ontology and to @hp_ontology from #SNOMEDCT will help advance research into hereditary and genetic conditions and improve #interoperability: bit.ly/3JJjc2s
@CUAnschutz, @ontowonka @sro_healthIT
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Dr. Sebastian Köhler retweeted
6 Feb 2023
We recently signed an exciting collaboration agreement with @MonarchInit! As part of the agreement, the organizations will work together to develop maps from #SNOMEDCT to @hp_ontology and to @hp_ontology from #SNOMEDCT. Learn more: bit.ly/3JJjc2s
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26 Jan 2023
Wow. Somebody using phenogramviz. Nice. Original paper was this: jmg.bmj.com/content/51/11/76…
26 Jan 2023
@hp_ontology @MonarchInit Phenograms to analyze structural variants in a neurodevelopmental disorder pubmed.ncbi.nlm.nih.gov/3669…
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Dr. Sebastian Köhler retweeted
21 Dec 2022
Absolutely! We should never forget that "legacy" systems were written by people doing the best they could to generate impact/ship features and so. IMO we should never underestimate that and we better learn from it and plan to evolve it in an organic way.
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Dr. Sebastian Köhler retweeted
22 Dec 2022
The @phenomizer algorithm by @drseb_ in 2009 has been adapted and applied to identify generalisable clusters on persons with #LongCovid
21 Dec 2022
@hp_ontology @MonarchInit
The Phenomizer algorithm (Sebastian Koehler et al 2009) adapted and applied to identify generalizable clusters on persons with long COVID
authors.elsevier.com/sd/arti…
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21 Dec 2022
„it may be useful to introduce specific training modules on the use of HPO nomenclature both in medical school curricula and in post-graduate clinical training programs.“
Anybody here want to share thoughts on how we could make this happen? @hp_ontology
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21 Dec 2022
Not any expensive standard is requested. Instead: free and truly open standards that have been proven to work. Read the paper at reader.elsevier.com/reader/s…
21 Dec 2022
@hp_ontology @MonarchInit
Bridging the language gap - A call for the wider use of Human phenotype ontology by non-geneticist clinicians when requesting genomic tests
pubmed.ncbi.nlm.nih.gov/3653…
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Dr. Sebastian Köhler retweeted
17 Dec 2022
HPO now also at mastodon. See @hpo@masto.ai
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18 Nov 2022
If you have a github account and are a fan of open standards for describing human symptoms and clinical descriptions, please „star“ the human phenotype ontology project on github. @hp_ontology #freestandards #openstandards
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Dr. Sebastian Köhler retweeted
28 Oct 2022
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20 Oct 2022
Quote of the day: „there can be no explanation without semantics“.
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22 Sep 2022
This happened so often for me in many obo ontologies. Tickets simply closed and seeing the change being implemented. No thanks or whatsoever
22 Sep 2022
Do not close GitHub issues on people without explaining exactly how they are addressed or why they are not addressed. This is not just annoying as hell, it also makes the issuer that took the time to write the issue feel unappreciated.
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Dr. Sebastian Köhler retweeted
2 Sep 2022
Took me 1 year and 6 different doctors in 3 countries to diagnose me with Ankylosing Spondylitis when a smart chatbot (@adahealth) found it in seconds. I, for one, welcome our robot diagnostician overlords.
2 Sep 2022
AI outperforms docs in diagnosing ear infections: No surprise, since one of the most robust findings in psychology ("clinical vs actuarial prediction") is that even simple statistical formulas usually outperform experts when compared head to head. hms.harvard.edu/news/head-he…
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Dr. Sebastian Köhler retweeted
29 Jul 2022
How do you capture discrete phenotype data in a busy clinical setting without leaving your EHR? #PheNominally! @jim_havrilla @IngoHelbig @hp_ontology @ChildrensPhila
bmcmedinformdecismak.biomedc…
Thanks to @evan_orenstein for the framework!
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