Join a #PredictionModelling presentation with Dr Oliver Pain @ollie_pain (Sir Henry Wellcome Postdoctoral Fellow @KingsIoPPN) discussing Polygenic scores and learnings from his work developing the #GenoPred pipeline.
➡️Wed 1 Oct, 3-4pm, Online
kcl.ac.uk/events/polygenic-s…
ALT Prediction Modelling presentations: Polygenic Scores in Practice: Standardisation, Missing Variants, and Lessons from GenoPred
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Webinar alert 🚨 🧬 🔬
Date: Wednesday, 13 November 2024
Time: 2pm CAT/ 3pm EAT /12 pm GMT
Speaker: Dr @ollie_pain (King's College, London)
Topic: The GenoPred pipeline: a comprehensive and scalable pipeline for polygenic scoring.
Registration Link: zoom.us/meeting/register/tJ0…
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26 Sep 2024
🧬 GenoPred utiliza #IA y #BigData para predecir el riesgo genético de desarrollar problemas de salud.
En Telómera, creemos que la medicina personalizada es clave para el futuro de la atención sanitaria. 🚀
Vía @Saludigital_Cs
i.mtr.cool/tqebcqztyj
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23 Sep 2024
The GenoPred Pipeline: A Comprehensive and Scalable Pipeline for Polygenic Scoring from @ollie_pain is now online.
Github & manual: opain.github.io/GenoPred/
Video: youtube.com/watch?v=dKiG8Udz…
academic.oup.com/bioinformat……
One-step polygenic score calculations
@NIHRMaudsleyBRC
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18 Sep 2024
The GenoPred Pipeline: A Comprehensive and Scalable Pipeline for Polygenic Scoring academic.oup.com/bioinformat… Docs opain.github.io/GenoPred/ trailer youtube.com/watch?v=dKiG8Udz…
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GenoPred, el software para predecir el riesgo genético de desarrollar problemas de salud via SaluDigital_CS consalud.es/saludigital/ia-b…
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6 Sep 2024
🧬🌍Check out our new paper on polygenic scores as risk factors for cardiometabolic outcomes in Africa.
Good to link together the AWI-Gen study and the GenoPred pipeline.
5 Sep 2024
🚨New Paper Alert 🚨
In @GenomeMedicine we show that ancestry-aligned PGS combined with conventional risk factors significantly enhance prediction of cardiometabolic outcomes in African populations.
#PGS #African
genomemedicine.biomedcentral…
@ollie_pain @cathrynlewis @sbimb1
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5 Sep 2024
Using #GWAS summary statistics from African Partnership for Chronic Disease Research (@apcdr) dataset we build polygenic scores for cardiometabolic traits in AWI-Gen using GenoPred pipeline from @ollie_pain
opain.github.io/GenoPred/pip…
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5 Sep 2024
El software 'GenoPred' sirve para predecir el riesgo genético de desarrollar problemas de #salud
📊 'GenoPred' combina la toma de datos individuales con las grandes #estadísticas
✒️ @jleundaCM
consalud.es/saludigital/ia-b…
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28 Jun 2024
GenoPred: A Comprehensive and Scalable Pipeline for Polygenic Scoring medrxiv.org/content/10.1101/…
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20 Jun 2024
Dr @ollie_pain, Sir Henry Wellcome Research Fellow at King’s MND Care & Research Centre, and Prof @cathrynlewis have launched GenoPred- Robust and Scalable Pipeline for Polygenic Scoring 🧬. Check it out! youtu.be/dKiG8Udz0rI?feature…
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13 Jun 2024
The GenoPred Pipeline: A Comprehensive and Scalable Pipeline for Polygenic Scoring.
medrxiv.org/content/10.1101/…
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13 Jun 2024
The GenoPred Pipeline: A Comprehensive and Scalable Pipeline for Polygenic Scoring. medrxiv.org/cgi/content/shor… #medRxiv
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4 Jun 2024
Do you calculate #polygenic scores?
Is it tedious and time-consuming?
Try GenoPred!
Easily installed, reproducible analysis, single command line. Choice of analysis methods, diverse ancestries.
Dr @ollie_pain & Prof @cathrynlewis have launched GenoPred - a tool that allows researchers to easily calculate #polygenic scores to uncover individuals' genetic risk for certain health-related outcomes 🧬
🔗 👉buff.ly/4c1hjJu
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Dr @ollie_pain & Prof @cathrynlewis have launched GenoPred - a tool that allows researchers to easily calculate #polygenic scores to uncover individuals' genetic risk for certain health-related outcomes 🧬
🔗 👉buff.ly/4c1hjJu
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29 Apr 2024
@LdnGeneNet Oliver Pain showcasing GenoPred, his ✨highly reproducible✨polygenic score pipeline. Very cool and useful for multiple method comparisons! opain.github.io/GenoPred/
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29 Apr 2024
Next, Ollie discusses the framework of GenoPred pipeline in detail, and functionalities of pipeline.
Parameters (input GWAS, reference panels and outputs) can be user-specified.
Shout out to Snakemake and Conda for reproducibility / construction of pipeline with ease.
#LGN2024
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29 Apr 2024
GenoPred requires input from genotype and phenotype data - computing 1KG-standardized PGS and comparison in prediction power.
GenoDisc performs functional annotations and fine-mapping using GWAS summary statistics as input.
#LGN2024
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29 Apr 2024
Next up we have Dr Oliver Pain’s talk on “GenoPred and GenoDisc”.
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12 Mar 2024
Much excitement in the AMBER room as @ollie_pain presents his GenoPred pipeline for #polygenic score calculation. Simple one-line user input reflects a complex well-designed resource. Fantastic resource, with clear documentation. opain.github.io/GenoPred/
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