Open source data warehouse system for the integration and analysis of biological data. From the Micklem lab at the @GeneticsCam
Joined April 2012
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- Following 723
- Followers 779
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451 Photos and videos
23 Oct 2024
We are delighted to announce a collaboration with the Database Center for Life Science (dbcls.rois.ac.jp/index-en.ht…) that includes them hosting the HumanMine (humanmine.org/) and FlyMine (flymine.org/) databases.
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24 Sep 2024
HumanMine and FlyMine have been unstable for the last few days due to hardware problems - we are sorry about this and will fix as soon as we can.
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15 Jul 2022
We are delighted to have our HumanMine article doi.org/10.1093/database/baa… published in the Database journal 🎉. Check it out to learn how to do powerful data exploration over biological data to gain new insights!
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InterMine retweeted
21 May 2022
This paper describes the @intermineorg take on building a Data Warehouse for the Human Genome. You won't be disappointed(!):
HumanMine: advanced data searching, analysis and cross-species comparison biorxiv.org/content/10.1101/…
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InterMine retweeted
20 Apr 2022
Intermine (@intermineorg) offers an API for querying their 'mines' for several model organisms like human, mouse, fly, thale, and yeast see intermine.org/training-porta… and training.cam.ac.uk/bioinform… to get an idea
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20 Apr 2022
🔧server upgrade on 🪛
Thursday 21 April 2022, 9-13 BST
HumanMine and our @usejbrowse service will be down during that time. Apologies for the inconvenience!
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InterMine retweeted
12 Jan 2022
Delighted to be one of the DARE UK @UKRI @HDR_UK Sprint Exemplars: building federated AI approaches & IG models for child mental health with @intermineorg @bitfount @AFNCCF @KaleidoscopeIG @AIMESHealth @Tamsin_J_Ford @psychiatry_ucam
bit.ly/3fh79Jh
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InterMine retweeted
22 Nov 2021
Do you know @intermineorg? It's an #OpenSource biological #data warehouse. Thanks to @NikhilVats_ it now features an option to download the Frictionless #DataPackage along with the results of any query.
Read more: frictionlessdata.io/blog/202…
#FrictionlessData #OpenData #BioData
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InterMine retweeted
24 Nov 2021
Follow our #ELIXIRRIRs:
@3DBIONOTES
@BridgeDbProject
@DisGeNET (RDF API)
@FAIRsharing_org
@fairtracks
@IdentifiersOrg
@intermineorg
@isatools
@molgenis
@OmicsDI
@plaza_genomics
#BioImageInformaticsIndex #gprofiler
#OntologyLookUpService @emblebi
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22 Sep 2021
FlyMine release 52 is out 😀
Thanks to @Gilby519 of @FlyBaseDotOrg for his help in updating our FlyBase parser
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InterMine retweeted
16 Sep 2021
I'm delighted to share our latest work published in Nature Sci. Reps (nature.com/articles/s41598-0…). In this paper we propose a deep learning-based system (Polyglotter), that in a general way supports the mapping of natural language searches to database queries. [1/5]
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InterMine retweeted
9 Jul 2021
ELIXIREurope: NEWS Schema.org releases a new version with ❺ @BioSchemas types for representing life sciences data
A big step towards improving #findability of life sciences web resources
@SSirarat @egonwillighagen @gray_alasdair #FAIRdata #…
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25 Jun 2021
HumanMine release 10 is out with the added data source @DisGeNET for disease associations😀.
humanmine.org/humanmine
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17 May 2021
An amazing post about @tinycosmoSpks #outreachy internship working on UX design for BlueGenes last year. A highly recommended read if you missed it! medium.com/intermine/summer-…
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10 May 2021
FlyMine and HumanMine are now running the new InterMine interface. Check it out! flymine.org and humanmine.org
#software #database #opensource #biology #data
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