Pleased to share that our lab was recently featured in a great piece, highlighting our work on understanding the gut microbiome.
Huge thanks to the Inside the Lab team for putting this together and for capturing the essence of what drives our research.
Could the key to understanding disease live within in our intestines? Microbiologist Sam Light's lab at UChicago is exploring the role of the microbiome—the billions of microorganisms within our guts—in finding treatments for diabetes and liver disease. ms.spr.ly/6011UQjah
Does an imbalanced gut microbiome worsen chronic kidney disease?
By elucidating the ecological causes for changes in the gut microbiota composition and its consequences for disease progression we were able to answer this question.
Read more at: pubmed.ncbi.nlm.nih.gov/4185…
Genome Biology is calling for submissions to the Collection "Non-bacterial metagenomics", which focuses on methods and applications that broaden metagenomic inquiry beyond bacteria! link.springer.com/collection…
This Friday's work in progress talk will be by Tess Brunner in the Light and Blekhman labs, talking about the gut microbiome as a longitudinal reservoir and adaptive niche for hospital-associated pathogens.
This week's COM invited speaker is Dr. Lauren Palmer from the University of Illinois - Chicago, talking about how amino acid competition shapes Acinetobacter baumanii gut carriage.
Please share this with anyone who may be interested in a post-doc in 🇩🇪
jobs.awi.de/Vacancies/2074/D…
An exciting opportunity to push the boundaries of what is known regarding the molecular basis of the formation and demise of photosymbiotic relationships in marine habitats.
1/ New preprint! We discovered that Bacteroidales in the gut microbiome can metabolize exogenous DNA 🧬 —turning genetic material into usable nutrients.
“DNA-utilization loci enable exogenous DNA metabolism in gut Bacteroidales”
👉 doi.org/10.1101/2025.03.18.6…
1/ Pleased to share a preprint of our latest work “Gut Bacteria Metabolize Natural and Synthetic Steroid Hormones via the Reductive OsrABC Pathway” led by @sciscorz and Chris J! See the rest of this thread for a summary of our findings. doi.org/10.1101/2024.10.08.6…
Hydrogen sulfide production distinguishes Salmonella from close relatives, but its biological significance remains obscure. This study uncovers the secret: Salmonella uses hydrogen sulfide production as a weapon to outcompete E. coli.
pnas.org/doi/10.1073/pnas.25…
A blog post that covers my visit to Barhal, the village where my family comes from:
merenlab.org/2025/09/01/barh…
No science this time, just life and personal reflections.
Congrats to postdoc @ZheZhou_ICA on her paper out today in @cellhostmicrobe showing that gut bacteria cross-feed a common dietary antioxidant to produce energy under anaerobic conditions. Big thanks to collaborators Angela Jiang and Xiaofang Jiang @NIH.
sciencedirect.com/science/ar…
Methylglyoxal: antibacterial effector
Methylglyoxal produced by infected macrophages upon transition to aerobic glycolysis acts as an innate immune antimicrobial effector that bacteria must detoxify for virulence and to prevent mutations
cell.com/cell-host-microbe/f…
🔬🦠 How to make sense of the taxonomic complexity & interpersonal variability of the gut microbiota? We propose that beneath this complexity lies a hierarchy of factors that control gut microbiota assembly. Read more! #Microbiome#GutHealthauthors.elsevier.com/a/1km32…
1/ New preprint! We discovered that Bacteroidales in the gut microbiome can metabolize exogenous DNA 🧬 —turning genetic material into usable nutrients.
“DNA-utilization loci enable exogenous DNA metabolism in gut Bacteroidales”
👉 doi.org/10.1101/2025.03.18.6…
8/🧬 Takeaway:
Extracellular DNA isn’t just genetic material—it’s a nutrient in the gut ecosystem.
And bacteria have evolved sophisticated systems to use it.
Could these pathways influence host physiology? That’s the next big question.