Unlocking the 🌎 of Single-Cell & Spatial Omics 🔬One cell at a time! 🔄 Building a community | Cátia Moutinho, PhD
Joined October 2022
- Tweets 874
- Following 447
- Followers 1,310
- Likes 214
68 Photos and videos
15 Aug 2024
🎙️ Ready to learn about the new #singlecell sequencing technology from @TakaraBioUSA 👉🏻 The Shasta System?
🎧 Listen now to our latest podcast episode with Shuwen Chen & @Moutinho_C
thesinglecellworldpodcast.po…
2
468
8 Aug 2024
Did you know?
👉🏻 @Illumina can now offer an end-to-end #singlecell workflow, thanks to their acquisition of @FluentBio
More details in our last blog post ✨
open.substack.com/pub/thesin…
1
2
336
1 Aug 2024
New podcast episode just released! 🚀
@Moutinho_C with Adrian Zambrano, Customer Success Manager at @cytena about their instruments for #singlecell sequencing.
Listen now: thesinglecellworldpodcast.po…
1
360
The Single Cell World retweeted
31 Jul 2024
Discover the future of 3D-omics! Our perspective aritcle explores how tissue clearing and AI with single-cell omics could revolutionize understanding of entire organs & organisms. Read the full article: nature.com/articles/s41592-0…
17 Jul 2024
What if we could map every cell in the body, revealing its location and molecular identity? In this @NatureMethods perspective, we discuss the new era of 3D-omics by tissue clearing and AI, called Deep 3D Histology: rdcu.be/dNBe8 PDF: bit.ly/3WaD0QU 🧵👇🏼
8
58
236
38,249
The Single Cell World retweeted
14 Jul 2024
1/ 23 tools to work with (single-cell) TCR/BCR-seq immune repertoire data🧵
2
21
76
21,278
The Single Cell World retweeted
15 Jul 2024
Today we’re pleased to release the Pixelgen Single Cell Spatial Proteomics Kit, Immunology Panel 2, Human v2 (product number PXGIMM002) or MPX v2.
pixelgen.com
#MolecularPixelation #MPXv2ishere #MPXv2 #Singlecell #Spatialproteomics #PixelgenTechnologies #spatialbiology
1
3
6
1,586
The Single Cell World retweeted
29 Jul 2024
A systematic overview of single-cell transcriptomics databases, their use cases, and limitations
frontiersin.org/journals/bio…
59
217
23,276
The Single Cell World retweeted
29 Jul 2024
Open-ST: High-resolution spatial transcriptomics in 3D👏👏👏 cell.com/cell/fulltext/S0092…
17
44
3,266
25 Jul 2024
Did you know that besides the well-known @BioLegend antibodies, others like @BDBiosciences , @Proteintech , or @abcam also offer antibody options for our single-cell experiments?
👇🏻 New blog post open.substack.com/pub/thesin…
96
18 Jul 2024
Curious about @BDBiosciences 's cutting-edge #singlecell high-throughput multiomics solutions? ✨
Join us in our latest podcast episode with Hasi Patel.
Special thanks to Stefano Bonelli.
#Podcast #singlecellworld
thesinglecellworldpodcast.po…
135
The Single Cell World retweeted
6 Jul 2024
Systematic comparison of sequencing-based spatial transcriptomic methods in @naturemethods
In summary:
“- Stereo-seq, Slide-tag, Visium shows the better capture efficiency with raw sequencing depth
- Slide-seq V2, Visium (probe), DynaSpatial gives the better capture efficiency with normalized sequencing depth.”
nature.com/articles/s41592-0…
16
71
11,538
The Single Cell World retweeted
6 Jul 2024
1/ 7 FREE Books to learn data science🧵
1
4
16
4,662
The Single Cell World retweeted
2 Jul 2024
Single-nucleus and spatial transcriptomic profiling of human temporal cortex and white matter reveals novel associations with AD pathology biorxiv.org/content/10.1101/…
15
34
3,876
The Single Cell World retweeted
1 Jul 2024
New review from @coletrapnell summarizing major statistical inference methods applied to single-cell, spatial, perturbation data to study gene function in healthy and disease states @NatureRevGenet nature.com/articles/s41576-0…
60
221
19,368
The Single Cell World retweeted
2 Jul 2024
So excited to announce our new method for multiplexed RNA imaging in bacterial cells: bacterial-MERFISH! A huge congratulations to the team of @AriSarfatis, Yuanyou Wang, and Nana Twumasi-Ankrah! Check out the following thread or our bioRxiv (biorxiv.org/content/10.1101/…) 1/12
13
157
581
76,993
🎯📢multiomics2024.org coming in hot!!! 📢🎯Get your registrations in!!! @JoeYeong @sitcancer
Speakers multiomics2024.org/speakers-…
Program: multiomics2024.org/program 🔬🧪
2
13
27
3,458
The Single Cell World retweeted
27 Jun 2024
CellTag-multi is finally out in @NatureBiotech nature.com/articles/s41587-0…. We didn't make the cover this time, but I love what we put together with @DrawImpacts! Here's our fun vision of CellTag cell barcoding and capture across single-cell RNA-seq and ATAC-seq @kjkjindal
17 Jun 2024
The June issue is live nature.com/nbt/volumes/42/is…
On our cover, Roohani et al. present GEARS, a computational method that integrates deep learning with a knowledge graph of gene–gene relationships to simulate the effects of genetic perturbations go.nature.com/3E37kEo
14
60
256
50,720
The Single Cell World retweeted
6 Jul 2024
Systematic comparison of sequencing-based spatial transcriptomic methods | Nature Methods nature.com/articles/s41592-0…
1
27
76
9,384
The Single Cell World retweeted
27 Jun 2024
Technology impacts the reliability of your #singlecell data. An independently conducted study reported that our Chromium Flex and 3' assays outperformed other technologies. See how the others stacked up: biorxiv.org/content/10.1101/…
8
14
2,036
27 Jun 2024
🎙️ New!
Discover A4cell SPAchips, the latest tech revolutionizing #singlecell research! 🔬
👉🏻 Tiny sensors that let us 👀 inside cells in real-time. Perfect to combine with #singlecell seq tech✨
With @Moutinho_C & Irene González
thesinglecellworldpodcast.po… #A4cell
126