Spatial genomics has existed for many years, but it has often been limited by complex imaging systems, specialized equipment, and $$$.
With IRISeq, we wanted to simplify this to a simple PCR rxn. nature.com/articles/s41593-0…
We are thrilled to have the following superstars join our fellowship program in July 2026. Congratulations to Erik, Wes, Tushar, Brian, May and Shawna, and congratulations to the MGH GI Division for recruiting such talent. Welcome to the family!
Excited to share new work from our team! Cognitive Behavioral Stress Management (CBSM) has been effective at reducing stress, and enhancing downstream neuroendocrine functioning, among women with breast cancer. But- this work has been in predominately high SES samples. @NGoelMD
Excited to share our preprint, describing a method for heritability partitioning with GWAS sumstats that significantly improves upon S-LDSC
Led by the fantastic Hui Li, and co-supervised by @XihongLin#ASHG24 poster 4089F
medrxiv.org/content/10.1101/…
How do genetic perturbations change cells? How are these effects shaped by cell type and dosage? How do we best extract insight from modern massive perturbation atlases? Im pleased to share a new preprint where we develop a suite of statistical approaches to these Qs (link below)
How do genetic perturbations change cells? How are these effects shaped by cell type and dosage? How do we best extract insight from modern massive perturbation atlases? Im pleased to share a new preprint where we develop a suite of statistical approaches to these Qs (link below)
Could not be more delighted to present our work investigating how over 220,000 complex and molecular trait-associated genetic variants affect transcriptional regulation using massively parallel reporter assays!
biorxiv.org/content/10.1101/…
See below for a 🧵. 1/n
Thrilled to have matched at @MGHMedicine in the Stanbury PSTP! Thanks to all my mentors, family, and friends for the support and love.
Thank you to all the patients who have taught me so much so far and the ones that I will learn from on my next journey!
Doctorin’ soon! 🩺🫡
We now know the locations of cell types in a full mammalian brain.
Our work reveals the brainstem’s absolutely stunning cellular complexity. How and why does it arise?
Visit braincelldata.org to plot genes, localize types, and get markers.
nature.com/articles/s41586-0…
Slide-tags unifies the single cell spatial genomics worlds. It solves three key problems with existing spatial methods:
1) Cell segmentation (the biggest problem)
2) robustness and scalability (well-powered case-control studies now possible)
3) Multiomics (ATAC, RNA, etc)
A new method called Slide-tags lets scientists capture both genetic and location information of individual cells using standard single-cell workflows in the lab. The technology builds upon Slide-seq, both developed by the labs of @insitubiology & @macosko. broad.io/slide-tags
Excited to announce I will be starting my lab in @BIDMCpath@BIDMC_CancerCtr at @BIDMC . Using chemical genomic approaches and thorough biochemistry we will focus on revealing new mechanisms of metabolism regulated cell death with a special focus on metal (copper) biology.
Excited to share the final version of our manuscript detailing our work in understanding some of the earliest cellular changes in AD from brain biopsies of living individuals: cell.com/cell/fulltext/S0092…
I remember @macosko describing this project to me in my first week as a graduate student -- awestruck both then and now, I am immensely grateful to all those patients who contributed their brain tissue while still alive (!) to our efforts to understand Alzheimer's disease.