@Jonathanthdk profile picture
Jonathan Thorsen @Jonathanthdk
Joined June 2019
  • Tweets 297
  • Following 562
  • Followers 265
1 Photos and videos
Jonathan Thorsen retweeted
Jens Walter@JensWalter15
1 Nov 2024
For somebody working on the gut #microbiome, the responses ("gross", "embarrassment", "pseudoscience", etc.) to this @Nature article on the treatment of C-section babies with their mother’s poo are quite sobering. So, I thought I would provide a perspective in the thread below.
nature
@Nature
25 Oct 2024
Feeding a baby born by caesarean section milk containing a tiny bit of their mother’s poo introduces beneficial microbes to their gut go.nature.com/48oD7hK
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Jonathan Thorsen retweeted
Kim-Anh Lê Cao 🦋@mixomics.org@mixOmics_team
3 Oct 2024
Our online mixOmics workshop starts on Oct 21. It is self-paced with 4 live webinars, and we provide advice to analyse your own data. You will learn about data exploration and omics data integration techniques! See 👇 mixomics.org/2024/06/online-… @MelbIntGen #omics #Rstats
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Lovely to come back from holiday and see this published, led by the great Trine Zachariasen. MAGinator is a wonderful resource helping unify taxonomy and functions in the analysis of metagenomes. Oh and the stuff Gisle said 👇 Now a @COPSAC_com default! Thanks all contributors!
Gisle Vestergaard@gisleDK
9 Jul 2024
Trine Zachariasen made this masterpiece during her PhD. Go check it out! MAGinator provides de novo identification of subspecies-level microbes and accurate abundance estimates of MAGs. Code and cluster setup using Conda and Snakemake on Github nature.com/articles/s41467-0…
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Jonathan Thorsen retweeted
Gisle Vestergaard@gisleDK
9 Jul 2024
Trine Zachariasen made this masterpiece during her PhD. Go check it out! MAGinator provides de novo identification of subspecies-level microbes and accurate abundance estimates of MAGs. Code and cluster setup using Conda and Snakemake on Github nature.com/articles/s41467-0…

MAGinator enables accurate profiling of de novo MAGs with strain-level phylogenies

Nature Communications - Metagenomic sequencing enhances microbiome analysis and understanding of microbial relationships but lacks tools for subspecies-level resolution. Here, authors present...

nature.com
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Jonathan Thorsen retweeted
DK Frie Forsk.fond@DFF_raad
8 Jul 2024
UGENS FORSKER: ”Jeg vil gerne forstå den rolle, som bakterier spiller for børneastma – særligt hos de små børn"🦠🩺 Sådan siger @Jonathanthdk fra @HerlevGentofte, der undersøger børneastma i målet om bedre forebyggelse og behandling af sygdommen. dff.dk/ansog/stottet-forskni…
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Jonathan Thorsen retweeted
Qian Cheng@sgqcheng
9 Jul 2024
.@microUCPH @Jonathanthdk @stokholm_jakob @COPSAC_com present MAGinator, a tool that enables accurate profiling of microbiomes with strain-level information. #BiotechNatureComms @NatureComms nature.com/articles/s41467-0…

MAGinator enables accurate profiling of de novo MAGs with strain-level phylogenies

Nature Communications - Metagenomic sequencing enhances microbiome analysis and understanding of microbial relationships but lacks tools for subspecies-level resolution. Here, authors present...

nature.com
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Jonathan Thorsen retweeted
Turvey lab@TurveyLab
17 May 2024
📢📢We are hiring📢📢 Looking for a senior post-doc/research associate with expertise in #immunology to lead our team in unravelling new human inborn errors of immunity. Our lab is in beautiful Vancouver 🇨🇦. Full details here: ubc.wd10.myworkdayjobs.com/u… @UBCMicroImmuno @UBC
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Help me find the right person! We are looking for a PhD student @COPSAC_com to explore the airway microbiome in childhood asthma. Great project, fantastic place to work & learn. Please share with anyone who might be interested. Questions? DM me! Thanks! copsac.com/home/about/jobs/p…

PhD student to explore the acute airway microbiome in childhood asthma - COPSAC

copsac.com
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Jonathan Thorsen retweeted
Gabriele Berg@GBerg_ubt
5 Apr 2024
We are hiring! Please consider this unique postion in planning your career @tugraz
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Jonathan Thorsen retweeted
Anna Hammerich Thysen ☘@anna_thysen
15 Mar 2024
I am looking for a #postdoc. Come join if you are curious about #type2 #immune regulation in #lung versus #brain. efzu.fa.em2.oraclecloud.com/…
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Jonathan Thorsen retweeted
HEDIMED@HEDIMED2020
12 Mar 2024
Save the date and register for the upcoming webinar: "Maternal inflammation during pregnancy and risk of immune-mediated diseases in birth cohorts" Tuesday, April 9, at 13:00 BST / 14:00 CEST selectscience.net/register.a… @Jonathanthdk @HEDIMED2020 @COPSAC_com @EUScienceInnov
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Jonathan Thorsen retweeted
CHILD Cohort Study@CHILDSTUDY
7 Feb 2024
Thanks to guests @nic_timpson of @CO90s (UK) 🇬🇧, @Melissa_Wake of @GenV_for_kids (Australia) 🇦🇺, @stokholm_jakob & @KlausBonnelykke of @COPSAC_com (Denmark) 🇩🇰 for sharing their incredible experiences with #birthcohorts at the CHILD @sickkids symposium! childstudy.ca/symposium-spot…
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Jonathan Thorsen retweeted
Sylvain Moineau@smoineau
15 Dec 2023
We wrote a grant in 2015, got funded in 2016 (JPIHDHL/Europe, DAHES/Denmark, INRAE/France, #CIHR/Canada), then a team of great scientists elevated this initiative to a new high. Extra funding led to this👇Huge congrats to the EarlyVir Team! #phage #COPSAC nature.com/articles/s41591-0…

The infant gut virome is associated with preschool asthma risk independently of bacteria

Nature Medicine - Components of the gut virome of 1-year-old children are associated with increased risk of development of asthma later in life, probably through direct interaction between phages...

nature.com
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Jonathan Thorsen retweeted
Talking CRISPR@TCrispr
15 Dec 2023
The baby #phage #asthma story is on the front page of politiken.dk now
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Jonathan Thorsen retweeted
Jakob Stokholm@stokholm_jakob
15 Dec 2023
So exited to share our newest paper in @NatureMedicine, where we link early life gut virome with later asthma. Specific compositions of temperate phages drive the association independently from their bacterial counterpart and interacts with host genetics. nature.com/articles/s41591-0…

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Thrilled and excited to be recipient of Sapere Aude research leader - the national Danish starting grant. I owe a lot of thanks to colleagues and collaborators, and of course to @DFF_raad for the support! Read more: (DK) dff.dk/ansog/stottet-forskni… (1/2)

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(EN) dff.dk/en/apply/supported-re… Read more about Sapere Aude and the other cool projects & researchers supported: (DK) dff.dk/aktuelt/nyheder/fri-f… (EN) dff.dk/en/current-news-and-e… (2/2)
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Jonathan Thorsen retweeted
Ole Lund@lund_ole
16 Nov 2023
I have an open position for a DTU Tenure Track Assistant Professor in Explainable AI Bioinformatics at the Bioinformatics Section at DTU Health Tech efzu.fa.em2.oraclecloud.com/…
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Jonathan Thorsen retweeted
Copenhagen Gut Microbiome Hub@CphGutHub
16 Nov 2023
We are live! 🚀 @hall_lab kicking off with keynote talk on the gut microbiome s a key regulator of health and disease in preterm infants. #cphgut 🌟
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📣New results on the role of the infant airway microbiota in childhood asthma! We went back to where it all began - the COPSAC2000 cohort - and sequenced 285 samples from 1-year olds 👶, which had hung out in the biobank for 20 years!❄️ Read more: doi.org/10.1038/s41467-023-4…

The airway microbiota of neonates colonized with asthma-associated pathogenic bacteria

Nature Communications - Here, Thorsen et al. bridge new and previous results from the COPSAC2000 prospective birth cohort and the later COPSAC2010 cohort, by constructing a combined bacterial...

nature.com
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(The samples were in the freezer, not the babies!) Published in @NatureComms Many thanks to team @COPSAC_com , our longtime partners in microbiomes @microUCPH as well as new ones @uni__augsburg @Xuanji_Li @bjersand @TCrispr @aneumann @txurv @KlausBonnelykke @stokholm_jakob
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