The official Twitter account of the John Marioni Lab - not John himself. Single cells, statistics and computational biology.
Joined April 2019
- Tweets 39
- Following 40
- Followers 4,324
- Likes 26
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MarioniLab retweeted
24 Jul 2024
Are you missing cells and cell types in your single-cell multiome experiments @10xGenomics? Check out EmptyDropsMultiome @MarioniLab
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MarioniLab retweeted
20 May 2024
Join our faculty: ebi.ac.uk/research/groups - our 9-year tenure nurtures our group leaders to go on to do great things: @VirginieUhlmann @MoritzGerstung @OliverStegle @MarioniLab @teichlab @pedrobeltrao
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MarioniLab retweeted
11 Feb 2023
Mark you calendars!
Next Cambridge Computational Oncology Meeting is May 5 at the EBI in Hinxton.
Speakers: Hillary Elrick @hbelrick , Alex Gutteridge @ruggedtextile and Peter Campbell
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MarioniLab retweeted
13 Mar 2023
Happy to present my recent work - a cluster-free method for DE testing, leveraging overlapping neighbourhoods in the graph representation of sc-data (aka miloDE): biorxiv.org/content/10.1101/… . A little thread below describes the motivation and suggestions on interpreting the results.
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The developing human lung has been mapped in unprecedented detail, identifying 144 cell states in the early stages of life, and uncovering new links between developmental cells and lung cancer.
ebi.ac.uk/about/news/researc…
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MarioniLab retweeted
29 Sep 2022
Excited to share @CarineStapel and my #singlecell #singleorganoid time course of #gastruloid development. We reveal substantial inter-organoid heterogeneity, and show why understanding it is critical in #organoid #perturbation experiments. A #tweetorial (1/18)
28 Sep 2022
Inter-gastruloid heterogeneity revealed by single cell transcriptomics time course: implications for organoid based perturbation studies biorxiv.org/cgi/content/shor… #bioRxiv
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AlphaFold DB will boldly go where no scientist has gone before.
With over 200 million protein structure predictions added to the database, AlphaFold DB now gives users open access to a 3D protein universe. #AlphaFold @DeepMind
ebi.ac.uk/about/news/technol…
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23 Jun 2022
A magical week at the Marioni Lab retreat - a blessing of (purple) unicorns indeed and many (uni)corny jokes
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John Marioni has been elected as a new Fellow to the @acmedsci 👏 in recognition of his remarkable contributions to biomedical science and the generation of new knowledge to improve the health of people everywhere. #AMSFellows2022
11 May 2022
Congratulations to our 60 new Fellows announced today
Find out more about these outstanding biomedical and health scientists and see the full list on our website: ow.ly/J2UV50J146j
#AMSFellows2022
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2 Feb 2022
We're hiring!
Looking for an enthuastic postdoc to join the team and work with single-cell genomics data to construct and compare senescence trajectories for cells. Deadline 22nd Feb embl.org/jobs/position/EBI01…
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The new @EMBL Programme has launched!
We're proud to be a part of @EMBL and we're looking forward to contributing our #bioinformatics expertise to this exciting new scientific programme that ushers in a new era in the life sciences.
EMBL embarks on a new era of molecular biology.
EMBL research will expand to study life in context – from molecules to ecosystems. Broad in scope, our next programme encompasses fundamental research, services & multidisciplinary collaboration.
embl.org/news/lab-matters/a-…
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MarioniLab retweeted
25 Oct 2021
Congratulations to @Blavatnikawards 🇬🇧 Finalist 🏅 Finalist in Life Sciences Dr. John Marioni @MarioniLab @emblebi @CRUK_CI #Blavatnik2021 bit.nyas.org/3n0x0Yb #computationalbiology #RNAtranscription
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What are the ripples of making data #openaccess? A recent independent report quantified these efforts to explore the role of #opendata in the life sciences today. #OAweek #opendata
ebi.ac.uk/about/our-impact/i…
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MarioniLab retweeted
30 Sep 2021
Differential abundance testing on single-cell data using k-nearest neighbor graphs go.nature.com/2Y69iSH
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7 Sep 2021
Still time to apply for our new postdoc position using computational approaches to study developmental trajectories across species. Deadline 19th September jobs.cam.ac.uk/job/31028/
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MarioniLab retweeted
18 Aug 2021
NEW POST: We (virtually) sat down with John Marioni, new collaborator on the Cancer Grand Challenges IMAXT programme @emblebi @CRUK_CI @sangerinstitute to find out more about his work and what excites him about the project. Read more - bit.ly/3svUnMP
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13 Aug 2021
We're looking for a new postdoc in the Marioni group - a two year position to work on developmental trajectories across species using single-cell approaches and data integration methods jobs.cam.ac.uk/job/31028/
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13 Aug 2021
Congratulations to Alsu @Alsu_Troost! Fantastic work.
12 Aug 2021
Very excited to share geneBasis - an iterative approach to select an informative gene panel from your fave scRNA-seq data in an optimal manner. A thread below to briefly describe key points, and for those who do not mind TLDRs - biorxiv.org/content/10.1101/…. 1/n
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20 Jul 2021
Fantastic to see @RArgelaguet and the team's work featured in this great @Nature article on the computational challenges of single cell multiomics! nature.com/articles/d41586-0…
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Congratulations to our very own John Marioni and @Alexbateman1 and @embl’s Takashi Hiiragi for being elected as new @EMBO Members. 🎉 #EMBO #ScienceAward @MarioniLab
ebi.ac.uk/about/news/announc…
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