Supporting and promoting openness and reproducibility in plant pathology as well as human equality we're most active at scicomm.xyz/@openplantpathol….
Joined January 2018
- Tweets 853
- Following 977
- Followers 3,322
- Likes 755
59 Photos and videos
Open Plant Pathology retweeted
1 May 2023
New addition to the R4PDE book. A shiny app that allows to visualize the shapes of four population dynamics models by varying initial inoculum and infection rate.
edelponte.shinyapps.io/epide…
@OpenPlantPath
5
24
1,823
Open Plant Pathology retweeted
8 May 2023
Very cool new tool for plant disease severity training from @edelponte at edelponte.shinyapps.io/train…
Choose leaf and lesion parameters and start training!
@OpenPlantPath @ufvplantpath @TropPlantPathol @plantdisease #IPM #agtwitter @planthealthprog
ALT Screenshot of severity training tool at https://edelponte.shinyapps.io/traineR/
16
50
5,959
Open Plant Pathology retweeted
6 Nov 2022
The time has come, we’re now also on Mastodon, scicomm.xyz/@openplantpathol… please join us!
2
3
30 Oct 2022
Rice disease modelling in Julia!
1
4
25 Oct 2022
We have a new blog post by @edelponte. Fit nonlinear models in #rstats to infection as a function of temperature and wetness duration openplantpathology.org/posts…
4
14
19 Oct 2022
If you're interested in #PSHB responses from a biosecurity perspective, @IrelandKylie has shared her recent @CCH_USQ seminar with us. It's available now on our YouTube channel. openplantpathology.org/posts…
19 Oct 2022
Beetle (Polyphagous Shot Hole Borer) #fungus Fusarium euwallaceae = #Fusarium #Dieback in multiple tree species.
@Shannon_C_Lynch discussed their work on endophytic #microbiome in this beetle-pathogen system using culture-based and metabarcoding approaches.
#PSHB @NPDN
ALT Shannon Lynch discussed their work on endophytic microbiome in this beetle-pathogen system using culture-based and metabarcoding approaches.
ALT Host species affected by Fusarium dieback disease.
ALT In vitro inhibition bioassays in Fusarium Dieback complex system.
1
6
8
22 Sep 2022
👀 New resource for #RStats users! A CRAN Task View for agriculture. Yes, it includes (a small) plant pathology section. Get busy and contribute, plant pathology community!
New CRAN Task View: Agricultural Science
#agriculture #rstats
By Julia Piaskowski @seedsandbreeds, Adam Sparks @adamhsparks, Janet Williams
URL: CRAN.R-project.org/view=Agri…
ALT Screenshot of the CRAN Task View "Agriculture" from https://CRAN.R-project.org/view=Agriculture
5
13
16 Sep 2022
The time invested in learning version control, e.g. Git, SVN, etc. is well worth it for many scientists that conduct computational research. It makes it easier to track your code changes and share your code too!
2
5
22 Aug 2022
He will be missed!
21 Aug 2022
Please post your messages, images, or videos to celebrate Dr. Madden's retirement kudoboard.com/boards/NazQ2iL…
1
1
9
3 Aug 2022
Fantastic to see our interview with @KamounLab being discussed again!
2 Aug 2022
Advice for plant pathologists #SASPP2022
1
5
28 Jul 2022
Here be dragons! New technologies like AI and Machine Learning are fantastic tools, but we should proceed with caution and know how to properly use them. #ReproducibleResearch
28 Jul 2022
Could machine learning fuel a reproducibility crisis in science? nature.com/articles/d41586-0…
9
19 Jul 2022
Hear, hear!
18 Jul 2022
I just published: Open science to tackle plant health emergencies: enough excuses please. link.medium.com/A5BpxpgOLrb
2
11
Open Plant Pathology retweeted
18 Jul 2022
This is a great idea, one place to find all the seminars from the Qld branch of APPS.
Well done @QldApps @OpenPlantPath 👏🥳
18 Jul 2022
We're happy to support the @QldApps of @Plant_Pathogens.
Recordings of previous seminars are on our @YouTube channel, youtube.com/playlist?list=PL…
More information is available from our website as well, openplantpathology.org/#cate…
#OpenScience
2
7
18 Jul 2022
We're happy to support the @QldApps of @Plant_Pathogens.
Recordings of previous seminars are on our @YouTube channel, youtube.com/playlist?list=PL…
More information is available from our website as well, openplantpathology.org/#cate…
#OpenScience
3
2
Open Plant Pathology retweeted
27 Jun 2022
Western Sydney Uni has a competitive PhD scholarship round open for a January start. If you are interested in applying for a project concerning (1) molecular signaling in chickpea disease resistance, or (2) plant signaling proteins involved in ectomycorrhizal symbiosis, DM me!
ALT chickpea nodules and eucalyptus colonized by pisolithus
14
47
105
22 Jun 2022
👀 "The datasets and custom R scripts generated and/or analyzed in this study are available in the @figshare repository, doi.org/10.6084/m9.figshare.…" 🤩🙌 #ReproducibleResearch #OpenScience
21 Jun 2022
Excited to share our work developing & comparing ImageJ vs machine learning image analysis methods to measure cassava bacterial blight symptoms. We hope these methods can be used by others studying CBB or be modified to study other plant diseases! plantmethods.biomedcentral.c…
3
5
20 Jun 2022
For all of you plant-microbe-soil interaction fans, we've a new USQ CCH seminar by @ch_birnbaum on our Youtube Chanel! openplantpathology.org/posts… #OpenScience
4
10
Open Plant Pathology retweeted
9 Jun 2022
@OpenPlantPath Help with stats. I need to analyze a time series experiment. qPCR data of viruses from potato tubers over time (6mo). I want to find the best detection window among other things. Any good references for time series in R?
1
2