Joined July 2022
- Tweets 156
- Following 67
- Followers 166
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46 Photos and videos
7 Feb 2025
Ferdous Nasri presenting her work on the 'Spatio-temporal immunity index tool for infectious diseases' at the Digital Health Summit @UCT_news in Cape Town, South Africa!
ALT Ferdous joyously next to her poster at UCT.
Happy that I had the honour of presenting my work at the Digital Health Summit in Cape Town, and got the chance to get into great discussions with researchers on the continent!
Thanks to @ictdchick for organising the summit and bringing us all together 💐
ALT Group photo of the Digital Health Summit attendees at the University of Cape Town in South Africa.
ALT Ferdous presenting a poster of her research on "Spatio-temporal immunity index tool for infectious diseases"
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7 Feb 2025
The work produces daily immunity indices for each regional location, given vaccination and infection data for different infectious diseases, which in turn can be used to, e.g., predict the spread of disease.
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2 Jan 2025
New paper: Electronic Health Records-Based Identification of Newly Diagnosed Crohn’s Disease Cases
By @SusanneIbing , @JulianHug0, et al., now available in Artificial Intelligence in Medicine.
authors.elsevier.com/a/1kA11…
🧵 1/6 Thread below:
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2 Jan 2025
When comparing coded conditions between identified cases and controls, we saw significant overrepresentation of GI-related conditions in cases, indicating the diagnostic delay of the disease.
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2 Jan 2025
With an ablation study, we demonstrated the added value of information derived from clinical notes not only for the computable phenotyping, but also the disease prediction task.
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2 Jan 2025
Happy new year from our group! 🥳😄
ALT The group standing in front of a meeting room smiling towards the camera.
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Check out “Electronic Health Records-based identification of newly diagnosed Crohn’s Disease cases”, a new paper from HPI·MS PhD student @SusanneIbing, Masters graduate @JulianHug0, and collaborators, now available in Artificial Intelligence in Medicine.
sciencedirect.com/science/ar…
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20 Sep 2024
... and that's a wrap from our group at #ECCB2024!
Thank you and congratulations to @EloLab_fi, @nyronen and
the organising teams for bringing together such a great conference!
Looking forward to the next @ECCBinfo 🚀
ALT Group photo in front of the ECCB banner. Smiling faces from left: Bernhard Renard, Julian Zabbarov, Ferdous Nasri, Yannick Hartmaring, Tobias Pietz, Marta Lemanczyk, Simon Witzke, and Katharina Baum.
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20 Sep 2024
Our collaborator Alexander Rakowski presented „Metadata-guided Feature Disentanglement for Functional Genomics“ @ECCBinfo #ECCB2024
Check out the proceedings paper: academic.oup.com/bioinformat…
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20 Sep 2024
Simon Witzke presenting his poster @ECCBinfo! #ECCB2024
@witsyke and @Iv_Pascal recent work in explaining aleatoric uncertainty in regression can help increase transparency in digital health.
ALT Simon Witzke happily standing in front of his poster.
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20 Sep 2024
They show that feature driving the mean prediction of low-density lipoprotein cholesterol considerably differ from the features driving aleatoric uncertainty. This highlights the value of uncovering hidden factors behind predictive uncertainty.
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19 Sep 2024
Check out Ferdous Nasri's poster (P410) @ECCBinfo now!
She will tell you about the spatiotemporal immunity index tool for infectious diseases ✨
#ECCB2024 #immunity #modelling #spatiotemporal
ALT Ferdous Nasri standing happily in front of her poster.
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19 Sep 2024
Towards connecting deep learning and ODEs: We present a framework to optimize synthetic dataset characteristics for time series forecasting in biological systems.
Meet @JulianZabbarov at poster 188, today from 5-6:30pm @ECCBinfo. #ECCB2024
ALT Julian Zabbarov smiling proudly in front of his poster titled "Optimizing ODE-derived Synthetic Data for Transfer Learning in Dynamical Biological Systems".
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19 Sep 2024
We proudly present PEPerMINT @ECCBinfo #ECCB2024, a new deep learning method for replacing missing peptide measurement values for improved downstream analyses!
doi.org/10.1093/bioinformati…
#DeepLearning
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19 Sep 2024
PEPerMINT is based on a graph neural network structure and also leverages amino acid sequence embeddings.
It is a joint project with the labs of Katharina Baum, Sukrit Gupta (@YoSukrit) and Hanno Steen (@steen_lab).
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19 Sep 2024
Listen to the talk held today by Tobias Pietz at 15:25 in Logomo Hall!
#ECCB2024 @ECCBinfo @BostonChildrens @HPI_DE @FU_Berlin
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