Spatial RNA sequencing - Available now. #RNAseq #microscopy
Joined March 2015
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As of December 10, 2018 Spatial Transcriptomics is part of 10x Genomics. Please follow us on Twitter at @10xgenomics and find more information at 10xgenomics.com/.
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Spatial Transcriptomics - Part of 10x Genomics retweeted
10 Dec 2018
We are excited to announce the acquisition of @STomics, a pioneer in the emerging field of #spatialtranscriptomics. The new field allows researchers to not only see what is in a cell, but how the cells are organized in relation to one another. bit.ly/2C24v7x
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Today we announced the acquisition of our company by @10xgenomics and are excited to have our novel technology for spatially-resolved transcriptomics join their best-in-class product portfolio. buff.ly/2EdpuWA
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Hello San Diego and hello @Neurosci2018! Meet us at booth 518 tomorrow!
#spatial #spatialtranscriptomics
buff.ly/2PZh9c9
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Great to meet you at #ASHG18. More fun is coming up, @Neurosci2018 is just one week away. See you there?
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Spatial Transcriptomics - Part of 10x Genomics retweeted
24 Sep 2018
Two great review papers on Spatial Transcriptomics
1) Curr Op in BioTechnology sciencedirect.com/science/ar… (@SItzkovitz @SItzkovitz and figure 3 below)
2) Science
science.sciencemag.org/conte…
(@slinnarsson )
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Now published - ST Viewer: a tool for analysis and visualization of Spatial Transcriptomics datasets | Bioinformatics | Oxford Academic academic.oup.com/bioinformat…
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Another elegant approach for combining single cell RNAseq with Spatial Transcriptomics by @ItaiYanai: Cancer archetypes co-opt and adapt the transcriptional programs of existing cellular states biorxiv.org/content/early/20…
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Spatial Transcriptomics - Part of 10x Genomics retweeted
23 Aug 2018
In our new preprint we propose that melanoma cancer cells can be classified to three ‘archetypes’ that co-opt the neural crest, mature melanocytes, and stress gene expression programs. They are also conserved between zebrafish and human tumors! biorxiv.org/content/early/20…
22 Aug 2018
Check out our work, now on bioRxiv: Cancer archetypes co-opt and adapt the transcriptional programs of existing cellular states
@ItaiYanai @whitefishlab
biorxiv.org/content/early/20…
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Read about the largest Spatial Transcriptomics project so far. More than 1200 tissue sections analysed. "Spatiotemporal Dynamics of Molecular Pathology in Amyotrophic Lateral Sclerosis" #spatialtranscriptomics biorxiv.org/content/early/20…
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Don't miss this sneak peek in Cell: "An Organ-Wide Gene Expression Atlas of the Developing Human Heart". Read it here: buff.ly/2vGAi9G - hope you find it interesting! #SpatialTranscriptomics
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By selecting any two regions you can easily discover the most differentially expressed genes. Read our showcase here: buff.ly/2uhOs03 #Spatial #SpatialTranscriptomics
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"Freely select your region of interest to generate a list of genes expressed in that region." Read more about how you can use #SpatialTranscriptomics in our showcase: buff.ly/2u1izd5
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Combine genes! Since all mRNAs are captured, you are not limited to visualizing only a single gene but can choose any number of genes. Read more: buff.ly/2L1zGlw
#spatial
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The data generated by a #SpatialTranscriptomics experiment allows you to choose any gene of interest and display its spatially resolved expression on the original tissue section. Read our showcase: buff.ly/2m8QaO1
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New publication out called: "Charting Tissue Expression Anatomy by Spatial Transcriptome Deconvolution". You can read it here: buff.ly/2NB6NOF
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To showcase the potential of the #SpatialTranscriptomics technology, a few potent analyses enabled by spatially resolved RNA sequencing data are presented in our showcase: buff.ly/2sXrziN
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Curious about what we can do? #SpatialTranscriptomics - all mRNAs spatially resolved. See our showcase: buff.ly/2sXrziN
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Have a look at this exciting manuscript on 3D reconstruction of intra-tumor heterogeneity!
buff.ly/2MGw1df #SpatialTranscriptomics
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