Algoscope empowers healthcare with AI, computer vision & 3D modeling , streamlining pathology workflows, ensuring accuracy, and full traceability .

Joined August 2025
26 Photos and videos
Funny timing @karpathy . @_ALGOSCOPE & @diagnexia were already vibing on this LLM Obsidian wiki idea weeks ago. Great minds think alike! 🤝
LLM Knowledge Bases Something I'm finding very useful recently: using LLMs to build personal knowledge bases for various topics of research interest. In this way, a large fraction of my recent token throughput is going less into manipulating code, and more into manipulating knowledge (stored as markdown and images). The latest LLMs are quite good at it. So: Data ingest: I index source documents (articles, papers, repos, datasets, images, etc.) into a raw/ directory, then I use an LLM to incrementally "compile" a wiki, which is just a collection of .md files in a directory structure. The wiki includes summaries of all the data in raw/, backlinks, and then it categorizes data into concepts, writes articles for them, and links them all. To convert web articles into .md files I like to use the Obsidian Web Clipper extension, and then I also use a hotkey to download all the related images to local so that my LLM can easily reference them. IDE: I use Obsidian as the IDE "frontend" where I can view the raw data, the the compiled wiki, and the derived visualizations. Important to note that the LLM writes and maintains all of the data of the wiki, I rarely touch it directly. I've played with a few Obsidian plugins to render and view data in other ways (e.g. Marp for slides). Q&A: Where things get interesting is that once your wiki is big enough (e.g. mine on some recent research is ~100 articles and ~400K words), you can ask your LLM agent all kinds of complex questions against the wiki, and it will go off, research the answers, etc. I thought I had to reach for fancy RAG, but the LLM has been pretty good about auto-maintaining index files and brief summaries of all the documents and it reads all the important related data fairly easily at this ~small scale. Output: Instead of getting answers in text/terminal, I like to have it render markdown files for me, or slide shows (Marp format), or matplotlib images, all of which I then view again in Obsidian. You can imagine many other visual output formats depending on the query. Often, I end up "filing" the outputs back into the wiki to enhance it for further queries. So my own explorations and queries always "add up" in the knowledge base. Linting: I've run some LLM "health checks" over the wiki to e.g. find inconsistent data, impute missing data (with web searchers), find interesting connections for new article candidates, etc., to incrementally clean up the wiki and enhance its overall data integrity. The LLMs are quite good at suggesting further questions to ask and look into. Extra tools: I find myself developing additional tools to process the data, e.g. I vibe coded a small and naive search engine over the wiki, which I both use directly (in a web ui), but more often I want to hand it off to an LLM via CLI as a tool for larger queries. Further explorations: As the repo grows, the natural desire is to also think about synthetic data generation finetuning to have your LLM "know" the data in its weights instead of just context windows. TLDR: raw data from a given number of sources is collected, then compiled by an LLM into a .md wiki, then operated on by various CLIs by the LLM to do Q&A and to incrementally enhance the wiki, and all of it viewable in Obsidian. You rarely ever write or edit the wiki manually, it's the domain of the LLM. I think there is room here for an incredible new product instead of a hacky collection of scripts.
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Two labs. Same specimens. Different realities. 🔬 Lab A: rulers, paper forms, errors found days later. Lab B: automated measurements, AI alerts, zero propagation. Same specimens. Different outcomes. VoxelPath doesn't replace your expertise , it amplifies it. #Pathology
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How much time does your team waste on manual data entry? ⏳ Too much. AccessPath digitizes prescriptions, automates LIS entry & ensures full traceability. No transcription errors. No lost paperwork. No wasted hours. Your team focuses on patients. AccessPath handles the rest. 👇
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Your slide looks perfect. But was it cut at the right spot? 🔬 Surgical specimens are 3D. Yet pathology still relies on 2D. VoxelPath changes that: ✅Real-time 3D models, ✅Automated volumetric analysis ✅Digital archive of specimen geometry From approximation to precision.
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The Unacceptable Risk series is complete. ✅ 5 episodes. 1 clear answer: Pathology deserves aviation-grade error prevention. Is your lab ready to demand it? 🎙️ Catch up on all 5 episodes. Then let's talk. #pathology #AlgoPath
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Episode 5. The finale. 🎬 Aviation didn't settle for "good enough." Neither should pathology. AI traceability. Digital verification. Zero tolerance for pre-analytical errors. This is the new standard of care. ▶️ Watch now. #pathology #MedTech
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Aviation built the black box to never lose the truth. ✈️ AlgoPath does the same for pathology. No gaps. No guesswork. No Lost Documentation ▶️ Episode 4 is live. Final episode drops soon. #pathology #MEDTECH
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Are your kidneys OK? #WorldKidneyDay #pathology
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Would you trust a medical device without certification? 🤔 ISO 13485 = safety, traceability & zero compromise. At Algoscope, every audit, every protocol protects one thing: your workflow integrity. Because Innovation without validation is just risk. #MEDTECH #ISO13485
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Episode 3 is live 🛫 17 manual steps. 1 in 100 error rate. Aviation fixed it with engineering. AlgoPath brings the same to pathology. ✅Automated traceability ✅Real-time error detection ✅Digital verification ▶️ Watch now. Episode 4 coming next. #pathology #MEDTECH
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3–4% pre-analytical errors. Sounds small? 64% of workflow disruptions start there. Algoscope x AAPA study across 101 pathology labs professionals in North America reveals what's really happening before diagnosis. AlgoPath fixes it. Automatically. Let's talk. 👇 #pathology
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230M people ask ChatGPT health questions every week. Now it's official: ChatGPT for Healthcare is live. 🏥 But can AI replace clinical judgment? At Algoscope: AI enhances. Never replaces. What's your take? 👇 #AIHealth #MEDTECH
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Not every lab needs the same solution. 🔬 VoxelPath Lite is built for biopsies & small specimens. ✅ Compact ✅ AI-powered traceability ✅ Real-time error detection Same technology. Right-sized for your reality. ▶️ See it in action. DM us to talk. 👇 #Pathology #MedTech
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Episode 2 is live. ✈️ 17 manual steps. From OR to diagnosis. 17 failure points. Handwritten labels. Wrong cassettes. Lost documentation. Aviation eliminated this chaos decades ago. Why not pathology? ▶️ Episode 3 drops soon. Follow Algoscope. #Pathology #AlgoPath
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Would you board a plane if 1 in 100 flights crashed?
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10 Dec 2025
A little magic in your daily routine? 🪄 Our new product is here. Press play to discover it.
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We've been waiting for this moment. Our booth at the DP& AI congress is finally confirmed! We're targeting the #UK market. If you're attending the DP&AI congress, come visit our booth #54. We'd love to connect.
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21 Nov 2025
Your insights, your challenges, your vision… This is what drives innovation forward in pathology. A huge thank you to everyone who visited the Algoscope booth at Carrefour Pathologie! 👉Follow us to be the first to discover what’s coming next in AI-powered pathology.
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Algoscope retweeted
thepathologist.com/issues/20… #Pathology isn’t just behind the scenes - it’s frontline care. Every blood test, biopsy and result starts the story of your health. 🧬 #Pathology #PrimaryCare #HealthcareInnovation @pathologistmag @UMichPath @UMichMedSchool @umichmedicine @ledje
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