Highly comparative time-series analysis feature-extraction software (-hctsa-) now available in python as pyhctsa!
Compute *over 4500* time-series features from time-series data!
Code: github.com/DynamicsAndNeural…
Docs: dynamicsandneuralsystems.git…
@kieran_s_owens (i) explains how all the methods can be understood through these conceptual groupings,
(ii) derives new relationships between existing methods, and
(iii) provides some case-study demonstrations/comparisons of how (insanely) well they can work on data
Better believe it, there are now TWO #timeseries feature sets available in #julialang.
The new CatchaMouse16.jl package joins Catch22.jl, bringing 16 more features tailored to (mouse) fMRI data: github.com/brendanjohnharris…
Check out the CatchaMouse16 paper below
New preprint by Rishi Maran @eli_j_muller
"Analyzing the Brain's Dynamic Response to Targeted Stimulation using Generative Modeling"
A review/perspective on why new mechanisms may be found by modeling brain stimulation dynamics 🧠⚡️
arxiv.org/abs/2407.19737
Quick summary 👇
Latest preprint: "Parameter Inference from a Non-stationary Unknown Process" (PINUP)
We're really interested in the problem of inferring sources of non-stationary variation directly from measured time-series data.
arxiv.org/abs/2407.08987v1
Quick summary 👇
If you're at OHBM this year, check out @AnnieGBryant's great work developing a systematic method to extract interpretable dynamical patterns from fMRI time series!
#OHBM very excited to share this (v2.0) at the 'Transdiagnostic Perspectives on Neurodevelopmental and Psychiatric Disorders - Part 1' 12pm oral session on Tuesday, and poster #1740 on Wed/Thurs afternoon! Come say hi 😊
Curious about scientific papers that have used hctsa for time-series feature extraction?
I maintain a log of this here, categorized across Biology, Cellular Neuroscience, Neuroimaging, Medicine, Pathology, Engineering, Geoscience:
time-series-features.gitbook…
"Extensive MEG time-series phenotyping unveils neural markers predictive of age"
Using the hctsa time-series feature set, finding age-predictive patterns of autocorrelation within the visual and temporal cortex.
doi.org/10.1101/2024.05.09.5…
Amazing work using the great pyspi package! We also used it in our recent work and examined the sensitivity of (only) 20 representative FC metrics regarding neural decline induced by age and malignant brain tumors doi.org/10.1101/2024.03.18.5…!
#Satellite ComplexTime explores temporal dynamics in complex systems across various domains. They invite submissions on topics related to temporal data handling, methods, and tools. Learn more at: sites.google.com/view/comple…