Job alert🚨 Postdoc (Computational Proteomics × Plant Immunity) 🌱
Join us to build a cross-species plant pan-terminome & study proteolysis in immunity🤝 with excellent collaborators: Bernhard Kuester, @wilhelm_compms, Pitter Huesgen, @Patrick14342109 , @Patrick18287926
Job alert🚨 Postdoc (Computational Proteomics × Plant Immunity) 🌱
Join us to build a cross-species plant pan-terminome & study proteolysis in immunity🤝 with excellent collaborators: Bernhard Kuester, @wilhelm_compms, Pitter Huesgen, @Patrick14342109 , @Patrick18287926
Bringing together researchers from proteomics, metabolomics, and related fields, CompMS bridges experimental and theoretical research to improve data integration and drive new discoveries in mass spectrometry.
Learn more about the CompMS COSI and discover ways to engage with the community: iscb.org/cosis/info
Today’s COSI spotlight is on CompMS: Computational Mass Spectrometry!
CompMS advances the analysis of mass spectrometry data by fostering collaboration, innovation, and training in computational approaches.
It took just 11 minutes to parse 57 million lines of text into 1.1 million MS/MS spectra from my big .msp library and filter it with matchms. Impressive. #CompMS
Hi, @jjjvanderhooft. Do you know an easy way to predict formula from MS1 isotope distribution in Python? I've tried running MS-FINDER from the command line but it's quite complicated. There must be an easier way.
#CompMS
See you Tomorrow, 5 pm CET / 8 am PST. Sign up for free and join the mzmine webinar and discussions. Learn more about mzmine and its interactive statistics and molecular networking dashboards.
#CompMS#metabolomics#lipidomcs#massspectrometry
Excited to attend and present at #ISMB2024@iscb! Make sure to check out our presentation during the CompMS section on July 13th! We'll be discussing waveome: a novel method for longitudinal metabolomics data analysis!
#postdoctoralfellow#metabolomics#molecularbiology#CompMS
Looking for talented and motivated postdoctoral fellows to join the Biochemistry of Plant Specialized Metabolites Group led by @tomas_pluskal@IOCBPrague@CzechAcademy.
🔶 Postdoctoral fellow in plant metabolomics will be applying metabolomics and molecular biology techniques to discover unique plant natural products and characterize their biosynthetic enzymes: pluskal.group.uochb.cz/en/op…
🔶 Postdoctoral fellow in computational mass spectrometry will be developing new tools and approaches for computational metabolomics, especially (but not limited to) using the popular @mzmine_project framework for mass spectrometry data processing: pluskal.group.uochb.cz/en/op…
Tomáš Pluskal Group combines cutting-edge experimental and computational approaches to develop rapid, generally applicable workflows for the discovery and utilization of bioactive molecules derived from plants.
Check out other available positions in the group: pluskal.group.uochb.cz/en/op…
Interested in imaging, metabolites and lipids, and how to do it with confidence? Check out Steffen's poster #362 today at #ASMS2024 on bringing MS/MS to imaging experiments. #SIMSEF#PASEF#mzmine
Thanks @EMN_MetSoc for highlighting my research! See you all at @MetabolomicsSoc#MetSoc2024 conference in Osaka, Japan. Or during our @mzmine_project workshop at @OISTedu on Okinawa.
Reach out to me if you want to join our effort on open mass spectral libraries and #CompMS.
Happy to see plantMASST out (biorxiv.org/content/10.1101/…). It is a community-curated database of nearly 20,000 LC-MS/MS data files from ~2,800 plant species, making them searchable. This allows one to directly connect plant's metabolites to their taxonomic distribution [1/4]
Our preprint describes an MSn library, a high-throughput acquisition method, and a #CompMS pipeline powered by @mzmine_project. Led by @corinnabrungs et al. we built the first #FAIR multi-stage fragmentation spectral tree library for >16,000 compounds. 1/n
doi.org/10.26434/chemrxiv-20…