18 Oct 2025
Methylation reference datasets from quartet DNA materials for benchmarking epigenome sequencing. #DNAmethylation #ReferenceDatasets #BenchmarkingMaterials #Epigenomics #Sequencing #Genomics @NatureComms
nature.com/articles/s41467-0…
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17 Oct 2025
Accurate somatic small variant discovery for multiple sequencing technologies with DeepSomatic. #SomaticVariants #ShortReads #LongReads #VariantCalling #Genomics #Bioinformatics #ToolsBenchmarking #ReferenceDatasets @NatureBiotech
nature.com/articles/s41587-0…
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22 Jun 2022
A multi-platform reference for somatic structural variation detection. #StructuralVariants #SVs #SomaticSVtruthSet #RawSequenceDatasets #ReferenceDatasets #Benchmarking #Sequencing #Bioinformatics
cell.com/cell-genomics/fullt… @CellGenomics
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17 Jun 2022
Comprehensive assessment of differential ChIP-seq tools guides optimal algorithm selection. #ChiPseq #ToolsBenchmarking #ReferenceDatasets #Bioinformatics
genomebiology.biomedcentral.… @GenomeBiology
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13 Nov 2021
Whole genome and exome sequencing reference datasets from a multi-center and cross-platform benchmark study. #CancerGenomics #SEQC2 #WGS #WES #ReferenceDatasets #LibraryPreps #Sequencers #DataPipelines #Benchmarking
nature.com/articles/s41597-0… @ScientificData
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17 Oct 2021
Expanding the Galaxy’s reference data. #Galaxy #ReferenceDatasets #DataManagement biorxiv.org/content/10.1101/… @biorxivpreprint #bioinformatics
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24 Nov 2018
Tools like the one proposed by @shenxingxing1 in this tweet are important part of the mapping of new #genomics datasets to the current knowledge of the #TreeofLife . Yeasts lend themselves to #highthroughput molecular analyses that turn them into fantastic #referencedatasets
20 Nov 2018
Looking for an empirical genome-scale data to evaluate performance of #phylogenetic program or to conduct analysis of #phylogenomic diagnosis? Please check a 2,408-gene, 343-taxon data matrix (1,162,805 sites) from @RokasLab @HittingerLab & many others! dx.doi.org/10.1016/j.cell.20…
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