21 Oct 2022
Here's one of our #services for researchers on
@Scilifelab Data Platform (data.scilifelab.se).
SubCellBarCode
👉 subcellular proteome resource and analysis pipeline
👉 methodologies, tools, data & support
👉 data.scilifelab.se/subcellba…
@LM_Orre @lehtiolab @scilifelab
1
4
Glad to see the SubCellBarCode is integrated into @SciLifeLab_DC.
Driving into the data and codes to explore the subcellular localisation of proteins:
Check the related papers below:
1, doi.org/10.1016/j.molcel.201…
2, doi.org/10.1038/s41596-022-0…
@lehtiolab @scilifelab
@karolinskainst
3 Oct 2022
📢SubCellBarCode- a new service on the
@scilifelab Data Platform
👉Read the Data Highlight
data.scilifelab.se/highlight…
👉SubCellBarCode service
data.scilifelab.se/subcellba…
@LM_Orre @lehtiolab @scilifelab
@karolinskainst @scilifelab @Vetenskapsradet
3
3 Oct 2022
📢SubCellBarCode- a new service on the
@scilifelab Data Platform
👉Read the Data Highlight
data.scilifelab.se/highlight…
👉SubCellBarCode service
data.scilifelab.se/subcellba…
@LM_Orre @lehtiolab @scilifelab
@karolinskainst @scilifelab @Vetenskapsradet
2
3
3 Oct 2022
Happy to announce that all tools and data related to our #SubCellBarCode project have been gathered in one place on @scilifelab Data Platform!😃
Just start digging through the material!
data.scilifelab.se/subcellba…
For a quick recap of the method, see the thread below!👇
23 Jun 2022
Good news for anyone interested in protein localization! The #proteomics workflow behind the subcellbarcode.org resource is now out in @NatureProtocols! 😃
Key features: the protocol covers wet lab, #MassSpec, #bioinformatics & applications 🧵1/6
nature.com/articles/s41596-0…
3
8
3 Oct 2022
📢SubCellBarCode- a new service on the @scilifelab Data Platform
👉Read the Data Highlight
data.scilifelab.se/highlight…
👉SubCellBarCode service
data.scilifelab.se/subcellba…
@LM_Orre @LehtiLab @scilifelab @karolinskainst
@scilifelab @Vetenskapsradet
1
4
3 Oct 2022
📢 New #service for researchers on @scilifelab Data Platform
SubCellBarCode
👉 subcellular proteome resource and analysis pipeline
👉 methodologies, tools, data & support
👉 data.scilifelab.se/subcellba…
@LM_Orre @LehtiLab @scilifelab @karolinskainst
5
7
29 Jun 2022
#FeaturedProtocol this week is for #SubCellBarCode - an iIntegrated workflow for robust #spatialproteomics by #massspec go.nature.com/3bycUDR @LM_Orre @lehtiolab
1
4
14
23 Jun 2022
SubCellBarCode: integrated workflow for robust spatial proteomics by mass spectrometry | buff.ly/3HMBb5l #proteomics
4
10
23 Jun 2022
SubCellBarCode: integrated workflow for robust spatial proteomics by mass spectrometry #NatProtoc nature.com/articles/s41596-0…
1
3
22 Jun 2022
SubCellBarCode: integrated workflow for robust spatial proteomics by mass spectrometry #machinelearning go.nature.com/3ye83QY
2
22 Jun 2022
SubCellBarCode: integrated workflow for robust spatial proteomics by mass spectrometry dlvr.it/SSfKg6 #nature #MassSpecPub
1
2
30 Mar 2021
This weeks image for #SciLifeLabArtTuesday is titled ‘SubCellBarCode’ (sent by @MSandProteomics) – a correlation network displaying the subcellular location of 7,000 proteins. Blue (Cytosol), Green (Nuclear), Yellow (Secretory), Pink (Mitochondria). More: instagram.com/scilifelab/
5
16
24 Feb 2020
Presentation tomorrow Tuesday in Flemingsberg: Find your protein localization with the Human Cell Atlas and SubCellBarCode. In 20 minutes, two Open Science databases in which KI researchers are involved will be presented. kib.ki.se/en/whatsup/events/…
1
2
23 Jan 2020
21 Jan 2020
New post I finally got around to finishing. My 10 favorite #proteomics papers of 2019. I've curated a list with a brief review for each of the papers I found interesting from last year (in no particular order). 😀 #science #sciencetwitter #research 1/11
medium.com/@tsbatth/my-10-fa…
6
27 Feb 2019
Interesting!
It looks like the #HiRIEF #proteomics method that we used to generate the data for the #SubCellBarCode project (PXD006895) has a very high potential for reaching even deeper into the peptidome, further improving the protein sequence coverage. We just need faster MS😀
1
1
Please take a chance to meet @LM_Orre and get more detail information from our recently @MolecularCell paper authors.elsevier.com/a/1YKs7…. And do not miss the opportunity to explore the #SubCellBarCode resource subcellbarcode.org.
Cell and Tumour Biology Seminar: SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization: Speaker: Lukas Orre, Onk-Pat, KI Host: Lars-Gunnar Larsson dlvr.it/QySy6R
2
Cell and Tumour Biology Seminar: SubCellBarCode: Proteome-wide Mapping of Protein Localization and Relocalization: Speaker: Lukas Orre, Onk-Pat, KI Host: Lars-Gunnar Larsson dlvr.it/QySy6R
1
1
3
7 Feb 2019
Similar enrichment analysis can of course also be performed at the #SubCellBarCode webpage subcellbarcode.org also don’t miss the underlying article in @MolecularCell
1
4
7 Feb 2019
Happy to see that our #SubCellBarCode #proteomics data is now uploaded in Enrichr database to enable #bioinformatics and enrichment analysis focused to subcellular localisation 😀
amp.pharm.mssm.edu/Enrichr/
1
6
9