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New in @The_InnovationJ! AI virtual fluorescent staining for label-free, multiplexed live-cell imaging. This perspective explores how AI-driven virtual fluorescent staining is redefining what is possible in live-cell imaging, ranging from recent technical advances to applications in biomedicine, and discusses future directions for this rapidly evolving field. doi.org/10.1016/j.xinn.2026.… #LiveCellImaging #Bioimaging #VirtualStaining
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Great program at Finnish Nordic Computational Biology Conference today and tomorrow @helsinkiuni! Thanks for the invite to talk about our research at @UEF_Biomed @UniEastFinland #cancerresearch #virtualstaining #histopathology nordic-compbio.org/ncb-week
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Our review article on #AI-based #virtualstaining is now published @TrendsinBiotech! Take a look at what future computational, less chemical-consuming #histology pipelines may look like & how we can get there. Co-authors @PekkaRuusuvuori @SonjaKoivukoski Umair Khan #sustainability
Our September issue is online! Laboratory automation (@Keasling_Lab), killer yeasts, cultivated meat, anammox bacteria (@DarioRShaw @SaikalyPascal), peroxisome engineering, virtual staining (@LatonenLeena @PekkaRuusuvuori) and more: cell.com/trends/biotechnolog…
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in our latest preprint, we ask if #VirtualStaining can be obtained for VACV, HAdV, HSV, IAV and RV biorxiv.org/cgi/content/shor…

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It was generated from this brightfield image using an #AI technique called #VirtualStaining. Using the morphological differences in infected cells (Cytopathic effect), #VirtualStaining can predict infection signal if trained using the real signal.
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Combining #virtualstaining, #StarDist and #brightfieldimagenormalisation 🤓 we quantify these differences and show that mitosis delays, cell arrest and cell activity reduction happen proportionally and can finely represent the early effects of phototoxicity
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Proud of @SonjaKoivukoski from our group @UEF_Biomed @UEFcancer @UniEastFinland presenting her successful PhD work on #virtualstaining in #digitalpathology of #breastcancer at #ECDP2024. Great collaboration with @PekkaRuusuvuori @UniTurku and Johan Hartman @karolinskainst groups.
Happy to have had the opportunity to present my work on virtual HE-staining of breast cancer whole slide images at #ECDP2024 today ☺️🔬#virtualstaining #digitalpathology
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Happy to have had the opportunity to present my work on virtual HE-staining of breast cancer whole slide images at #ECDP2024 today ☺️🔬#virtualstaining #digitalpathology
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🔬🤖Excited to share our new preprint on robust virtual staining of key organelles! biorxiv.org/content/10.1101/… ✨ Virtual staining and segmentation of nuclei and cell membranes in phase images can significantly accelerate image-based screens and developmental studies. 🔍 Current virtual staining models often struggle with nuisance variations in label-free input and don't generalize well to new cell types. We’re releasing our training protocols that lead to robust models and enable few-shot generalization. 🔧 Stay tuned for our revamped codebase with weights and example data, coming soon! 👏🧫🐟 Huge shoutout to @ZW_Liu, @edyoshikun, my team @czbiohub (Soorya, Johanna, Christian, @TalonChandler, @ieivanov1), and the teams of @LeonettiManuel, Carolina Arias, and @Adrian_Jacobo for this fun collaboration! #VirtualStaining #DL #CellBiology #Zebrafish
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We take advantage of #SMLMS happening right after to gather together experts in #superresolution #microscopy, #livecell imaging, DL development for #denoising, #restoration, #virtualstaining or #imagegeneration, and foster the cross-pollination of ideas for #AIenhancedmicroscopy
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Honoured to talk today at the 50th Anniversary Seminar of the Finnish Assoc. for Cell Biology @solubiologit at @uniofjyvaskyla about how #AI can improve #cellbiology in #research & #healthcare. Our research group represented also by @SonjaKoivukoski talking about #virtualstaining
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Happy to share our fresh review article on the new technology for #histology: #virtualstaining. On the path to increased #sustainability and enhanced pipelines for #pathology with #deeplearning. Online now in @TrendsinBiotech. @UniEastFinland @UEF_Biomed sciencedirect.com/science/ar…

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Another poster presentation from @SonjaKoivukoski about our HE #virtualstaining for #histopathology raising a lot of interest at the 7th #ScanPath meeting today. #cancerresearch @UEF_Biomed
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As a student @#DLMBL, these past two weeks served as a reminder of how great @MBLScience can bring people from different fields to do great science! Thank you 'Chroma Crafters' @ashesh0 @dz_gong @Anks_8D it was a pleasure working on #virtualstaining and #μSplit 🎉🔬🎨
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As a TA in the DL@MBL 2023 course, last two weeks at @MBLScience were fantastic! Amazing interactions with participants, TAs and the faculty, tasty #KeylimePie 🥧, and at the end working with @Anks_8D, @dz_gong and @edyoshikun on #virtualstaining and #μSplit. 🎉🔬🧑‍💻
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@SonjaKoivukoski presenting a lightning talk of our project in #AI based #virtualstaining for #histology at @UniEastFinland Workshop on Imaging Data today #DataDrivenResearch #bioimageanalysis #biomedicalimaging #bioimageinformatics @UEF_Biomed
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Proud to see a great presentation on #AI based #virtualstaining in #histology by our grad student @SonjaKoivukoski at the @UEF_DPMM Winter School! @UEF_Biomed @UEFcancer
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