The free, collaborative 3D encyclopedia of proteins & other molecules. Structural biology resource for everyone from children to structural biologists.

Joined April 2010
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New from Eric Martz ( @MolvizOrg ): PACUPP: Pockets And Cavities Using Pseudoatoms in Proteins, provides easy tools to see size and shape of a cavities in complex macromolecular structures (even beyond just proteins); get a list and volume. umass.edu/microbio/chime/pac…
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Proteopedia retweeted
9 May 2019
Join us for our final webinar of the spring next Friday, May 17! Learn to scan and visualize #genomes with PatMatch and Circos apps in CyVerse VICE: bit.ly/30aUiQ0 We're delighted to introduce presenter @fomightez of Upstate Medical University: github.com/fomightez
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Proteopedia retweeted
23 Mar 2018
Hey #science and #education people. Can you help me share this opportunity for middle and high school teachers to work with us through @EvoEducation this summer?
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We are asking contributors and users take a quick survey, designed in collaboration with the RCSB Protein Data Bank, on how they use molecular structures to teach and learn. surveymonkey.com/r/LTHBW9P

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Proteopedia retweeted
High resolution structure of Piezo1 #ionchannel by #CryoEM. Work by Kei Saotome, an awesome postdoc in Andrew Ward & my lab: nature.com/articles/nature25…. Immediate hints of mechanical gating... See also from Mackinnon lab: elifesciences.org/articles/3…. I am biased, but this is beautiful!
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Proteopedia retweeted
18 Dec 2017
SNPViz - a new tool for visualising #SNP locations in 3D #protein structure @Kay_Bioinfo #datavisualisation #CitedEnsembl buff.ly/2l3mRyQ
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Now, that's impact: 15 FDA approved drugs bound to their respective #GPCR goo.gl/tqpg3u #OpenAccess
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16 Nov 2017
A #structural view of human #mitochondrialtranscription initiation gives new insights into its unique mechanism and regulation. bit.ly/2AMkyCY
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A landmark result! Ratchet-like polypeptide translocation mechanism of the AAA disaggregase Hsp104 science.sciencemag.org/conte…

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Structural differences between yeast & mammalian MTs that likely underlie their differing polymerization dynamics jcb.rupress.org/content/earl…
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Systematic identification of phosphorylation-mediated protein interaction switches (with @MechismoNews) journals.plos.org/ploscompbi…
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Proteopedia retweeted
27 Mar 2017
#biocuration2017 John Westbrook: "Unlike wine, data formats don't generally improve with age"
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Structure of human #CFTR almost identical to fish, with a few surprises. And: #cryoEM marching on goo.gl/RVNF43
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Remarkable. Molecular Structure of the Human CFTR Ion Channel cell.com/cell/fulltext/S0092…

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As of Tuesday 21 March, 21:48 GMT, Proteopedia is in full Read-Write mode again. Please report any problems, proteopedia.org/wiki/index.p…

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The site is currently in read-only mode until March 21st while it is moved to a better server. See proteopedia.org/wiki/index.p… for more details.

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