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Qianqian Fang /房骞骞/ @FangQ
Joined April 2009
  • Tweets 894
  • Following 250
  • Followers 521
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Qianqian Fang /房骞骞/@FangQ
28 Apr 2024
Here are the 5 guiding principles of @NeuroJSON: 1.Open-data MUST BE provided in "source-code" format 2.Open-data MUST BE human-understandable 3.Diverse data formats do harm to #openscience and #opendata 4. Small is beautiful 5. Metadata is your data neurojson.org/wiki/index.cgi…

NeuroJSON Project

NeuroJSON - Scalable, searchable and verifiable neuroimaging data exchange platform

neurojson.org
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check out #jdict, a @MATLAB and @GnuOctave dictionary class that behaves more similarly to #Python's #dict and #xarray objects it can daisy-chain key/subkeys like Python's dict, and can set attributes such as dims like xarray just add this single unit: raw.githubusercontent.com/Ne…
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Halloween 🎃 is a good time to unleash this monster! be scared, be very scared! 👻 👻 👻
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checkout the newly released #MCX v2025.10, bringing international language support (MCX/#MCXStudio), faster simulations (MCX-CL/MMC), critical bug fixes (MMC) and across-the-board Python support (#pmcx/pmcxcl/pmmc) to our global user community Download at mcx.space/wiki/?Get
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checkout our new preprint biorxiv.org/content/10.1101/… NeuroNavigatAR (NNAR) is an augmented reality (AR) tool that displays head 10-20 landmarks in real time using a simple webcam NNAR is open-source, download it from github.com/COTILab/NeuroNavi…
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also check out the new NeuroJSON.io data browser #pip install --upgrade jdata import jdata as jd jd.neuroj('gui') this shows a simple window, letting you listing all databases, datasets, and all JSON-encoded data records, including 1000 datasets from #OpenNeuro
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if you use #nibabel for processing #BIDS data, check out our newly added alternative NIfTI-1/2 nii/nii.gz file reader/writer in #iso2mesh v0.5.1 python3 -m pip install iso2mesh iso2mesh.loadnifti() is lightweight, self-contained & fast, 1.4x faster than nib.load in benchmarks
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A special occasion and lab dinner for celebrating the 5th PhD graduating from my lab, Rahul Ragunathan, for successfully submitting his final dissertation Rahul is the most hardworking student I've ever worked with. Whenever I stop by the lab, he is there, even on the weekends.
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Qianqian Fang /房骞骞/ retweeted
Anna Devor@AnnaDevor
6 Aug 2025
Love diffuse optical imaging and support open source science? Special Section "fNIRS Commons: Datasets and Tools for Open, Reproducible Science" is for you! Edited by @FangQ, Meryem Yucel, @avolu_neurotech, Adam Eggebrecht spiedigitallibrary.org/journ…
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Qianqian Fang /房骞骞/ retweeted
Alexander von Lühmann@avolu_neurotech
6 Aug 2025
🚨 The #FRESHstudy is published in @NatureComms Biology! 🧠 38 int. #fNIRS teams analyzed the same dataset. 🔍 No 2 pipelines alike 🤝 80% group-level agreement ⚠️ Big variability at individual level 📈 #Reproducibility linked to experience SNR 📖 Read: rdcu.be/ezfRd
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Announcing a new Special Section for @SPIEtweets #Neurophotonics: "fNIRS Commons: Datasets and Tools for Open, Reproducible Science" Call-for-paper: spiedigitallibrary.org/journ… Co-editing with @MeryemAYucel, @avolu_neurotech, and @adameggebrecht Read more: linkedin.com/feed/update/urn…

Neurophotonics

spiedigitallibrary.org
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Our fast high-quality brain mesh generator #Brain2mesh toolbox (mcx.space/brain2mesh) has been ported to Python! get it today by installing the #iso2mesh Python module v0.4.2 from pypi pypi.org/project/iso2mesh or register/download here github.com/NeuroJSON/pyiso2m…
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New art installation in my office ...
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Considering a physics-based logo? here is one for #mcx, Venon style, made using a combination of #pyiso2mesh and #pmmc full code is here linkedin.com/feed/update/urn… you can change the string to anything you like
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Glad to announce that our #GPU photon simulator #mmc now supports Python pypi.org/project/pmmc/ The recently port of mesh-generator #pyiso2mesh makes a perfect duo for #mmc, here is how to build a physically accurate simulation in just a few lines mcx.space/wiki/?Learn#mmc
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Checkout this #pyiso2mesh tutorial at github.com/NeuroJSON/pyiso2m… You can also directly run it via @GoogleColab by clicking on this link colab.research.google.com/gi… Lots of progress have been made over the past week on porting/testing key #iso2mesh functions to #Python
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#pyiso2mesh - the native #Python version of #Iso2Mesh (iso2mesh.sf.net) is out and usable pyiso2mesh is aimed to be compatible with Iso2Mesh, easy-to-use, fast, and capable of "one-liner" mesh-generation Install: python3 -m pip install iso2mesh pypi.org/project/iso2mesh/
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🌍 International language support (#i18n) in #MCX is finally coming! 🎉🎉🎉 mcx.space/nightly/github/ use -y or --lang command flag, or cfg.lang in mcxlab, or cfg['lang'] in pmcx native speakers:📢 help me verify if the translations make sense🙏 code github.com/fangq/mcx/blob/ma…
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#fNIRS #neuroimaging researchers, I would like to invite you to participate a quick survey to help us rollout a scalable free data sharing portal at NeuroJSON.io neurojson.org/wiki/index.cgi… single-page, 10 questions, only a few min of your time @NeuroJSON Thanks 🙏🙏🙏
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📢📢📢New paper alert came out last week on #ScientificReports nature.com/articles/s41598-0… You can direct 3D print optical phantoms of complex shapes with tissue-like absorption and scattering using only off-the-shelf printers and PLA filaments. here are some phantom samples
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Check out our latest paper on Scientific Reports nature.com/articles/s41598-0… it is an ultra-high-density optical breast tomography (DOT) system that can be used standalone, or jointly used with existing mammogram. It uses patterned illumination & camera, with dense spatial sampling
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