Mighty pleased with this one. My first paper from my postdoc at the Malhotra lab @CRGenomica. We challenge how 'bulky' cargo are organised in the ER lumen and propose a new model for their export. Big thanks to the good people at @JCellBiol for their handling of the paper!
In contrast to prevailing dogma, @afororange et al. report that procollagen 1 assembles into a liquid condensate within cells, resolving the long-standing problem of how cells accommodate and export high concentrations of these bulky molecules from the ER. hubs.la/Q04l3yPd0
Great Viewpoint from Vivek Malhotra @JCellBiol!
COPII proteins, essential for cargo export from the ER, form not only coated small vesicles but also collars at tubule necks and phase-separate into liquid-like condensates, adapting to physiological demand.
rupress.org/jcb/article/223/…
1/n My postdoc work on the evolution of mitosis in Ichthyosporea @Dey_Gautam@dudin_o @SchwabYannick groups is out @Natureshorturl.at/KPRQw Art by @nirupa_rao contrast fungal-like closed with animal-like open mitosis. Why do cells carry out mitosis in different ways?
🙌🏿 Congratulations to Vivek Malhotra on his election to the American Academy of Arts and Sciences @americanacad
Dr Malhotra, group leader of the Intracellular Compartmentation lab at #CRG, joins a distinguished collection of leaders and professionals across many fields.
Announcing our new members! The Academy is honoring excellence in an array of disciplines and professions, and inviting these new members to join our work to advance the common good. The first members were elected in 1781. Learn who was elected in 2024: amacad.org/news
Our biophysical model in @PNASNews! ER export of collagen driven by a mechanochemical ratchet formed by expansion-contraction of intrinsically disordered regions (IDRs) of TANGO1, and gradients of pH/HSP47. IDR “breathing” produces work with each breath.
pnas.org/doi/10.1073/pnas.23…
Collagen transport through inter-compartmental tunnels! Our theoretical model, led by the Pincet group @LP_ENS_, for how molecular gradients between organelles drive cargo transport through a tunnel - even without a cargo receptor.
biorxiv.org/content/10.1101/…
Happy to share with you, our piece on how the molecular membrane fission machine - dynamin is regulated by 'gears' in its membrane binding PH-domain. @TPucadyil and I curated this brief review for Current Opinion in Cell Biology. Now online: authors.elsevier.com/c/1hPJK…
TransitID is out today in Cell! This is a proximity labeling method for unbiased discovery of endogenous proteins that traffick from a defined “source” location to a defined “destination” location. TransitID uses sequential labeling by TurboID in the source, followed by a chase period (minutes to hours) and then 1-minute APEX tagging in the destination compartment. Proteins tagged by both enzymes are enriched with streptavidin and anti-fluorescein antibody, and identified by mass spec.
We explore 4 intracellular and intercellular applications of TransitID:
- discovery of locally translated mitochondrial proteins (translated at OMM, then imported into mito matrix)
- mapping proteins whose cytoplasm-to-nucleus shuttling is dampened by stress
- discovery of proteins that transit between nucleolus & stress granules during stress & stress recovery
- analysis of proteins that traffic intercellularly bw tumor cells & macrophages
Work of amazingly talented co-first authors @WeiQinChemBio and @CheahJoleen, and collaborators Steve Carr @namude & Paul Taylor
authors.elsevier.com/a/1hKLc…
1/2 Our stressed-out PhD scholars deserve a long-overdue increase in their stipends. The revision was due in 2022 after an already delayed raise in 2019. How can they meet their daily needs & undertake research amid rising inflation?
@IndiaDSTindiatoday.in/education-toda…
Our work about superPLD is now published! In this paper, we describe how we can harness mammalian cell-based directed evolution to engineer a membrane editor (phospholipase D; PLD) with superior performance in mammalian cells. 1/n nature.com/articles/s41557-0…
A tour the force of #geneediting and #STED. We have followed up on some of these findings and have 2 papers that will drop soon! looking at endogenous proteins at high resolution in their own unperturbed cellular environment is helping to reveal important trafficking mechanisms!