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#fNIRS #neuroimaging researchers, I would like to invite you to participate a quick survey to help us rollout a scalable free data sharing portal at NeuroJSON.io neurojson.org/wiki/index.cgi… single-page, 10 questions, only a few min of your time @NeuroJSON Thanks 🙏🙏🙏

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Hotpot night 🍲 🥘 new group photo 📸 👪, we welcome our two new lab members, Hari - our in-house programmer, and Rose (Yiyi) Liu - our new PhD student. We are building a great team for further advancing our @NeuroJSON and #MCX_MMC projects, among other new adventures.
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Just to let everyone know, you can find me on 🦋🦋🦋@bluesky at bsky.app/profile/fanglab.org @NeuroJSON is also on bluesky at bsky.app/profile/neurojson.i… will crosspost new tweets, follow if you like

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Replying to @FangQ @NeuroJSON
Excellent.
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Stop by my student Ivy Yen's poster, #071, today at @fNIRS2024 #fNIRS2024, she will show you our latest #LLM driven #neuroimaging data query and pipeline automation tool at NeuroJSON.io @NeuroJSON
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We have just closed the in-person registration in order to start finalizing the the logistics for the upcoming #MCX/@NeuroJSON workshops the remote-only registration is still on, and I will leave it open until June 15 mcx.space/register/workshop/…
🙌Congrats to following students for receiving our travel awards for #MCX/@NeuroJSON workshops -Ernesto Pini, U. of Florence, Italy -Laura Quintana Quinana,U. Las Palmas de Gran Canaria, Spain -Daniela Leizaola,FIU,US -Otavio Perez Palamoni, IFSC,Brasil -Navid Ibtehaj Nizam,RPI
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🙌Congrats to following students for receiving our travel awards for #MCX/@NeuroJSON workshops -Ernesto Pini, U. of Florence, Italy -Laura Quintana Quinana,U. Las Palmas de Gran Canaria, Spain -Daniela Leizaola,FIU,US -Otavio Perez Palamoni, IFSC,Brasil -Navid Ibtehaj Nizam,RPI
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I have got multiple requests on allowing remote participation for our upcoming #MCX_MMC and @NeuroJSON training workshops Happy to announce that we plan to stream our training workshops for remote participants Please register for joining us remotely: mcx.space/register/workshop/…

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Here are the 5 guiding principles of @NeuroJSON: 1.Open-data MUST BE provided in "source-code" format 2.Open-data MUST BE human-understandable 3.Diverse data formats do harm to #openscience and #opendata 4. Small is beautiful 5. Metadata is your data neurojson.org/wiki/index.cgi…
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Please note that the workshop dates has changed - New dates: June 29-30 for MCX workshop July 1-2 for NeuroJSON workshop/hackathon please register with this link mcx.space/register/workshop/…
#MCX_MMC in-personal workshop is back! Our 5th MCX training workshop will be held on Jun 23-26 in @Northeastern ISEC, joint with the 1st @NeuroJSON workshop/hackathon Seats limited; please register ASAP. Competitive travel grant available to students. mcx.space/register/workshop/…
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Important update: the date of the workshop has changed due to conflict with a conference. New date: June 29-30 for MCX workshop, and July 1-2 for @NeuroJSON workshop/hackathon
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A particular focus of @NeuroJSON is the extraction, indexing and search of metadata - we run metadata-distillation in multiple tiers - from separating searchable/binary data in the dataset->JSON conversion, to CouchDB _design doc indices, to metadata search, or latest AI summary
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Replying to @FangQ @GnuOctave
@NeuroJSON neurojson.io portal is built upon #opensource @CouchDB server, supporting all CouchDB REST APIs. that means you can query,select,index and download/upload all JSON-encoded scientific data with just a URL (@MATLAB: webread/webwrite, #Python urllib.request)
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Here is the full poster that I will be presenting on Apr 7 on our @NeuroJSON data portal neurojson.io it has 1000 @BIDSstandard datasets in a @CouchDB server, >42000 subjects. Love to talk to you about sharing your datatsets. Currently #fnirs data is hand handful.
Replying to @FangQ
3:30 PM - 3:30 PM JS4A.34. NeuroJSON.io — a community portal for sharing neuroimaging and biophotonics public datasets this is my poster - been heavily working on this myself over the last 6 months, lots of updates - I will start a new thread to provide more details
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#JSONLab 3.0β is finally here🎉 first big release since funded by @NeuroJSON U24 👍supports #JSON-mmap for disk-map like fast read/write of JSON/binary JSON files 👍supports #JSONPath 👍dynamic download/cache linked data 👍@blosc2 compressor support ⚡️ github.com/fangq/jsonlab/rel…
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@MeryemAYucel & @avolu_neurotech, I am wondering if you have BIDS version of your #OpenfNIRS datasets? I also uploaded those to NeuroJSON.io, w/ @BoasDavid's blessing neurojson.org/db/openfnirs but they are not in @BIDSstandard, my metadata extractor does not work well

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Once a dataset is converted to JSON and uploaded to our @CouchDB server on NeuroJSOn.io, we further extract (automated) dataset-level & subject-level metadata, and make those searchable for example, we can search "Yucel" and find this dataset neurojson.org/Search#query=e…

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Replying to @obsdmd
interested in extending to 3D graphics objects? I have a #JMesh spec defined discrete shapes using pure JSON annotations github.com/NeuroJSON/jmesh/b… en.wikipedia.org/wiki/JMesh we have also incorporated #JMesh format in our neuroimaging data portal @NeuroJSON neurojson.org/db/brainmeshli…$

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If you haven't had chance to fill out this @NeuroJSON community survey, I am very much appreciated if you can fill out this 1-page google form using the below link neurojson.org/survey/2024-1 for those who had submitted your feedback, thank you so much! 🙏🙏🙏
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