I would play around with PCA (PCATools is a fun program in R), look for the PCs that separates the samples according to serially changing time and look at the PCA loadings for those particular PCs!

PCAtools: everything Principal Component Analysis in R/BioC bioconductor.org/packages/re…

Tool Technique Tuesday. Data visualisation is key to identify potential batch effects and eventual interpretation of the results. One way is to project multiple dimensional data onto a 2D plot, PCA/MDS with #rstats tool by @KevinBlighe PCATools. bioconductor.org/packages/re…

PCAtools: everything Principal Component Analysis bioconductor.org/packages/re… حزمة R قوية لل PCA مراجعة كاملة مع شرح بسيط #بيانات_فهد #تعلم_مجانا #المعلوماتية_الحيوية #المعلوماتية_الصحية #علم_البيانات مدونتي: fahad-data.blogspot.com

PCAtools: everything Principal Component Analysis bioconductor.org/packages/re… التحليل عبر المركبات الرئيسية مراجعة شاملة وعميقة حزمة PCAtools #بيانات_فهد #تعلم_مجانا #المعلوماتية_الحيوية #المعلوماتية_الصحية #علم_البيانات مدونتي: fahad-data.blogspot.com

PCAtools - Bioconductor nzzl.us/hicsrI2 via @nuzzel thanks @kozo2

The latest @Bioconductor release also saw major updates to #PCAtools. Now additions for generating group ellipses, overlaying loadings on bi-plots, and using PCs to make model predictions #biostats #PCA #bioinformatics #dataviz bioconductor.org/packages/re…

kevinblighe/PCAtools github.com/kevinblighe/PCAto… #bioinformatics

yeah I remember I used that! Lots of packages are using #ggplotify , like #PCAtools by @KevinBlighe . Also - I just came across #cowplot wilkelab.org/cowplot/index.h… it offers different ggplot2 theme customization as well - looks interesting!!

Cannot believe I was not aware of either! #OmicsPCA bit.ly/2AeP8dw by Subhadeep Das & #PCAtools bit.ly/2WjrB3v by @KevinBlighe the detailed documentation and visualization is amazing. Marked! #PCA #omics #EDA #dataviz #RStats