The Common Fund Data Ecosystem (CFDE) Workbench is a portal developed by the CFDE Data Resource Center (DRC). It is available from: cfde.info.
Joined January 2024
- Tweets 127
- Following 52
- Followers 21
- Likes 111
7 Photos and videos
Jan 26
Our paper “The CFDE Workbench: Integrating Metadata and Processed Data from Common Fund Programs” is now published @JMolBiol 🎉 The CFDE Workbench info.cfde.cloud/ makes NIH Common Fund data FAIR and AI-ready to empower cross-program discovery 🔗 tinyurl.com/5ak2vrjp
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17 Jul 2025
The #CFDEWorkbench platform (info.cfde.cloud/) now supports gene set #EnrichmentAnalysis 🥳 👏🌎🥁data.cfde.cloud/enrichment
You can now query your gene sets against gene set libraries created from 8 @NIH_CommonFund programs. #CFDE @LINCSProgram @MaayanLab @gly_gen @_hubmap
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CFDE Workbench retweeted
20 May 2025
The @CfdeWorkbench analysis platform #GeneSetCart genesetcart.cfde.cloud/ is now published at @GigaScience pubmed.ncbi.nlm.nih.gov/4020… Read more about it @NIH_CommonFund #CFDE website: commonfund.nih.gov/dataecosy… and how it was applied to study #AxD disease. #Bioinformatics #AI #genesets
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CFDE Workbench retweeted
It's day 1 of @FoGenomics come stop by booth 60B across from the Genome Dome to learn everything #CommonFundDataEcosystem! #FestivalofGenomics @CfdeNih @NIH_CommonFund @CfdeWorkbench
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CFDE Workbench retweeted
11 Jul 2025
Join us on Thur. July 24 @ 2 PM ET for a virtual seminar about ChEA-KG, a newly developed @MaayanLab web-based app that enables users to analyze their gene sets in context of a human gene regulatory network (1559 transcription factors). Please register at maayanlab.cloud/turl/35e9d6a…
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CFDE Workbench retweeted
Unable to join today's #CommonFundDataEcosystem #PublicWebinarSeries with Dr. Allissa Dillman? The webinar recording is now live here: youtu.be/x1GQxeCdZEM @NIH_CommonFund @CfdeWorkbench
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CFDE Workbench retweeted
In two weeks we will host our next #CFDEPublicWebinarSeries! Join us from 1-2 PM ET to hear from Dr. Allissa Dillman from the CFDE Training Center. Learn more about the event here: cfdeknowledge.org/r/CFDE_web…
@NIH_CommonFund @CfdeWorkbench #CFDETrainingCenter
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CFDE Workbench retweeted
Learn how we combine the best knowledge graphs can offer with statistical analysis, LLMs & human curation for the @NIH_CommonFund CFDE KC. @ncats_nih_gov 👇
2 Apr 2025
🔍 How can Knowledge Graphs, LLMs, and statistical data integration work together in biomedical research?
Join the dkNET Webinar with Dr. Jason Flannick on April 11 at 11 AM PT to explore the future of biomedical data!
More info: dknet.org/about/blog/2827
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CFDE Workbench retweeted
14 Mar 2025
#dkNET presents a "Building Knowledge Graphs Towards Transparent Biomedical #AI
" #webinar with Dr. Jie Liu - Join us today at 11 am PT!
More info: dknet.org/about/blog/2821
#MachineLearning #DataScience #bioinformatics #diabetes #genomics
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14 Mar 2025
Podcast with Dr. Shankar Subramaniam about integrating and making @NIH_CommonFund data more accessible. Highlighting @CFDEWorkbench cdfe.info, a robust info and data portal for researchers to access and analyze omics datasets effectively tinyurl.com/yka7jjpc.
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CFDE Workbench retweeted
25 Jan 2025
Read this great article about @AviMaayan, alumnus of @FDUWhatsNew
fdu.edu/fdumagazine/fdu-maga…
Dr. Ma'ayin is doing great things at @IcahnMountSinai!
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CFDE Workbench retweeted
5 Feb 2025
The CFDE Workbench: Integrating Metadata and Processed Data from Common Fund Programs biorxiv.org/content/10.1101/… #biorxiv_bioinfo
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CFDE Workbench retweeted
We have so many incredible speakers that will be presenting at our workshop on Friday! Join us to hear cutting edge scientific research from 10 AM - 2 PM ET. Registration is open here: tinyurl.com/mpmnmvrh @CfdeWorkbench @motrpac @TerraBioApp
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CFDE Workbench retweeted
Join us on February 28th for our next installment of the #CFDEPublicWebinarSeries featuring @4DNucleome's Peter Park presenting "4D Nucleome Turns 10: Mapping the Dynamic Architecture of the Genome." Register for the event here: broadinstitute.zoom.us/webin… @CfdeWorkbench @CfdeNih
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CFDE Workbench retweeted
21 Jan 2025
· Interested in applying to the #ComplementARIE #NewApproachMethodologies Data Hub and Coordinating Center #FundingOpp? Join the #InformationalWebinar on 2/13/25 at 11am ET! bit.ly/NDHCC_Webinar
ALT Text reads: “New Funding Opportunity! The NIH Common Fund Complement-ARIE Program. Funding Opportunity Webinar. NAMs Data Hub and Coordinating Center. Join the Informational Webinar. February 13th, 11AM-12PM ET. Four linear images are shown on a laptop screen representing artificial intelligence, in vitro, in silico, and in chemico technology.
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CFDE Workbench retweeted
25 Nov 2024
Just a few days left to register for the #NuclearArchitecture Meeting hosted by #4DNucleome! Join us in San Diego, CA on December 11-13, 2024. The deadline to register is Monday, December 2nd. Register today! bit.ly/3X9gha0
ALT Card with text reads: 4D Nucleome presents Nuclear Architecture Meeting December 11-13, 2024, Wyndham San Diego Bayside - San Diego, CA. Registration now open! The NIH Office of Strategic Coordination logo is below.
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CFDE Workbench retweeted
25 Nov 2024
#NutritionforPrecisionHealth is advancing precision #nutrition and was featured on @CBSSunday! The study is led by a coalition of NIH partners, including #NIHCommonFund, the Office of Nutrition Research, and @AllofUsResearch. Enrollment is open! Watch here allof-us.org/3UY1zkm
ALT Card with the NIH, All of Us Research Program, and the CBS Sunday Morning logos. Text reads: Watch NIH’s study Nutrition for Precision Health, powered by the All of Us Research Program on CBS Sunday Morning!
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CFDE Workbench retweeted
Do you develop and market scientific tools? Join us tomorrow, November 22nd from 1-2 PM ET to learn various strategies from #COMPA and @MetaCell during our #CFDEPublicWebinarSeries. Register here: broadinstitute.zoom.us/webin… @CfdeWorkbench @NIH_CommonFund
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CFDE Workbench retweeted
4 Nov 2024
The @CfdeWorkbench team will showcase the #CFDE information portal (cfde.info), the #CFDE data portal (data.cfde.cloud), and #GeneSetCart (genesetcart.cfde.cloud/) at #ASHG2024 #ASHG24. To learn more about the #CFDE visit booth 571. @NIH_CommonFund @CFDEKC
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