@WellcomeTrust Sir Henry Dale Fellow based at @HumanGeneticsOx, interested in chromatin disruption in human disease. He/him. Mastodon: rbeagrie@qoto.org
Joined June 2013
- Tweets 675
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8 Photos and videos
Pinned Tweet
13 Aug 2024
šØ Job alert
Hiring a postdoc (comp or wet lab) to work on chromatin & genetics š§¬
Come work with us @HumanGeneticsOx in the beautiful @UniofOxford
šļø Closing September 13th
Details at beagrielab.com/join
Pls share and RT!
#PostdocJobs #GeneticsJobs #genomics #cohesin
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22 Aug 2024
Very happy to have been able to help out with this one - some very cool work! #genomics
21 Aug 2024
Great collaboration between the @FoldingGenome and Watkins labs, reporting the first Gain of Function de novo enhancer causing Mendelian disease (ST Depression Syndrome), defining a multidisciplinary path with ML to solving non-coding clinical genetics.
medrxiv.org/content/10.1101/ā¦
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Rob Beagrie retweeted
28 Feb 2024
Calling all rare disease researchers and clinicians who have a variant of uncertain significance... š§¬
The @MRCMouseNetwork & @NMGN_CongAnom (co-led by our PI @srftwigg) are currently looking for VUSs to model in mice! š
(1/2)
ALT A flyer advertising details of the call for variants of uncertain significance.
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Rob Beagrie retweeted
27 Feb 2024
And itās #PhDone! Rachel Kimber, first PhD student in my lab @BabrahamInst, has brilliantly defended her thesis today. Thanks to @carovinuesa and @viropractor for examining Rachaelās thesis. Well done, Dr. Kimber š„³ šš„
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Rob Beagrie retweeted
6 Feb 2024
Fantastic day talking science @BigDataIns. Thanks for the invitation to share our research @RobBeagrie - it was great to see some familiar faces (the lovely Yang Shi!), put some faces to names/emails, and meet some new!
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Rob Beagrie retweeted
29 Jan 2024
If you are willing to learn low input techniques to explore the chromatin of your favourite organism, don't hesitate to apply to this hands-on course! We'll be teaching you Low-C, ATAC-seq, CUT&RUN, and its bioinformatic pipelines.
š Applications are open for our Low Input #Epigenomics course! #LowInput24
Learn how to apply the latest experimental and #computational approaches for studying #ChromatinBiology at both the gene and #genome-wide levels
š©Apply by 14 February 2024
šbit.ly/3ta7HeD
ALT A group of scientists standing in a training laboratory. They are all wearing lab coats and safety gloves. Text reads: Low Input Epigenomics 2024 Course dates: 10-17 May 2024 Location: Wellcome Genome Campus, UK Application and bursary deadline: 14 February 2024
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22 Jan 2024
Applications are now OPEN for an internship in my group at Oxford University. Open to UK undergraduates from under-represented and disadvantaged backgrounds ā apply by Wednesday 21 February 2024 to join us this summer: ox.ac.uk/admissions/graduateā¦
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Rob Beagrie retweeted
16 Jan 2024
Very excited to share that our work reconstructing chromothripsis has now been published in @CellGenomics! We reconstructed chromosomes with up to 800 rearrangementsĀ on a single allele and queried epigeneticĀ and transcriptomic consequences. Thread below!
cell.com/cell-genomics/fulltā¦
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Rob Beagrie retweeted
5 Jan 2024
Submissions for technology track presentations are also open - go to iscb.org/ismb2024/submissionā¦ and apply by May 10th to showcase your bioinformatics/molecular biology software or hardware to the community #Bioinformatics #ComputationalBiology #ISMB2024
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Rob Beagrie retweeted
5 Jan 2024
You can now submit your new, unpublished work for publication as a proceedings paper at ISMB 2024! Full details are available at iscb.org/ismb2024/submissionā¦ - the deadline is January 25th #Bioinformatics #ComputationalBiology #ISMB2024
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Rob Beagrie retweeted
2 Nov 2023
Applications are now open for a fully funded @SoCoBioDtp PhD project with myself (@sotonbiosci ) and Jerome Swinny (@portsmouthuni) ā¦ please get in touch to discuss the project! Deadline Jan 8th.
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Rob Beagrie retweeted
11 Oct 2023
Is anyone here using the UKBiobank 200k genomes dataset? We are having some weird issues and are trying to troubleshoot if data vs code š¬ Anyone else seeing anything odd?
Either way, please share! š§¬
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Rob Beagrie retweeted
8 Sep 2023
How cis-regulatory elements interact to regulate gene expression-role of CTCF and cohesin- check out our pre-prints @MRC_WIMM @jrmmhughes @FoldingGenome @RobBeagrie @JefBoeke @MolecularCell @NAR_Open @CTCF_Papers @generegulation
biorxiv.org/content/10.1101/ā¦
biorxiv.org/content/10.1101/ā¦
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28 Sep 2023
Looking to do a PhD in 2024? Interested in gene regulation, chromatin and disease? Applications are now open so come join beagrielab.com at the @HumanGeneticsOx ! Further details below but if you're interested DM me to talk about possible projects. Deadline Dec 1st 1/3
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28 Sep 2023
There are two different DPhil programs you can apply to: if you want first-year rotations and more of a focus on computational biology then you might be interested in our DPhil in Genomic Medicine and Statistics well.ox.ac.uk/study/gms 2/3
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28 Sep 2023
If you know what you want to do and are ready to jump straight into a project, you might be interested in a DPhil in Clinical Medicine ox.ac.uk/admissions/graduateā¦ - happy to talk through the differences with any interested candidates 3/3
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Rob Beagrie retweeted
19 Jun 2023
19 Jun 2023
Multiplex-genome architecture mapping (multiplex-GAM) facilitates rapid, unbiased and ligation-free determination of chromatin interactions, as compared to Hi-C.
@apombo1 @RobBeagrie @anto_scial @LonnieRWelch @LabPombo @helmholtz_de
nature.com/articles/s41592-0ā¦
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Rob Beagrie retweeted
22 Jun 2023
Multiplex GAM is out! Congrats @LabPombo @apombo1 !!
Coming to a brain near you!!
nature.com/articles/s41592-0ā¦
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Rob Beagrie retweeted
19 Jun 2023
Multiplex-genome architecture mapping (multiplex-GAM) facilitates rapid, unbiased and ligation-free determination of chromatin interactions, as compared to Hi-C.
@apombo1 @RobBeagrie @anto_scial @LonnieRWelch @LabPombo @helmholtz_de
nature.com/articles/s41592-0ā¦
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Rob Beagrie retweeted
12 Jun 2023
The paper about CIARA - our method to find rare cells in scRNAseq data - is now published in Development!
One of the major additions to the preprint is the analysis of scATAC-seq datasets, showing how CIARA can find rare cells in other types of single-cell omic datasets too.
12 Jun 2023
CIARA: a cluster-independent algorithm for identifying markers of rare cell types from single-cell sequencing data
Read this Techniques and Resources Article by Gabriele Lubatti, Marco Stock, Ane Iturbide, @anto_scial & colleagues @HelmholtzMunich:
journals.biologists.com/dev/ā¦
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