Joined May 2022
- Tweets 93
- Following 391
- Followers 256
- Likes 289
5 Photos and videos
UCSC Cell Browser retweeted
16 Oct 2025
With the government shutdown impacting GEO submissions, we're happy to help researchers share their single-cell data in the meantime.
You can easily submit datasets here: cells-submit.gi.ucsc.edu/
We’re not a substitute for GEO, but an alternative tool for hosting and visualizing
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22 Nov 2024
🧠We've just add the Human Neural Organoid Cell Atlas to the UCSC Cell Browser!
Come explore it here: hnoca.cells.ucsc.edu
Big congratulations to ZhiSong He et al. and the whole team on this massive atlas!!!!👏
#singlecell #brainorganoids #developingbrain #neuraldisease
6 Oct 2022
So honor and excited as a part of the great team with @josch_f @SophieMJ_Jansen leaded by @TreutleinLab @GrayCampLab. In our @Nature study, we generated a #singlecell atlas of early #brainorganoid development, and studied regulations of cell fate decision nature.com/articles/s41586-0…
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22 Mar 2024
Congrats to Dr. Alison Cole @Alison20132006 for her recent publication in Frontiers in Zoology! Come explore the updated Nematostella V2 Atlas. 👇
sea-anemone-atlas.cells.ucsc…
19 Mar 2024
Check out our updated single cell atlas of Nematostella, by @AlisonCole: doi.org/10.1186/s12983-024-0…
It was completely remapped on the new chromosome scale genome and gene annotation (PMID: 38092765), but also contains new data and analyses. Great work, Alison!
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UCSC Cell Browser retweeted
13 Sep 2023
This is just one example of how our meta-atlas can generate testable hypotheses. Check out/download our data from the UCSC Cell Browser (dev-ctx-meta-atlas.cells.ucs…). (13/16)
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UCSC Cell Browser retweeted
14 Nov 2023
I’m at @czisinglecell2023 if you’re interested in @cellbrowser let me know
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3 Nov 2023
🐁 Another amazing mouse dataset to check out! Come learn about rare newborn cells in mouse brains:
adult-mouse-brain-newborn.ce…
Many thanks to our submitter Ziyu Lu! @ziyu__lu
#singlenucleus #snRNAseq #progenitorcells #mouse #oligodendrogenesis #neurogenesis #TrackerSci
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24 Oct 2023
New rat dataset! 🐀 Come explore the rat liver atlas on the UCSC Cell Browser.
rat-liver-atlas.cells.ucsc.e…
Special thanks to our submitter Delaram Pouyabahar! @DelaramPB
#rat #singlecell #liver #atlas #transcriptomics
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12 Oct 2023
Big congratulations to Yonatan and team at UCSF on releasing their new paper in Science! 👏
You can explore this prenatal and postnatal human cortical development dataset on the UCSC Cell Browser:
pre-postnatal-cortex.cells.u…
#SingleCell #humanbrain #corticaldevelopment
12 Oct 2023
Check out our new paper, just released: Single-cell analysis of prenatal and postnatal human cortical development | Science science.org/doi/10.1126/scie…
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UCSC Cell Browser retweeted
12 Oct 2023
Our single cell atlas from trigeminal ganglion cells was released on @cellbrowser ! Check out
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cells.ucsc.edu/?bp=trigemina…
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12 Oct 2023
🐁New mouse dataset! Come view a single cell atlas of mice trigeminal ganglion cells:
trigeminal-ganglion.cells.uc…
Many thanks to our submitter Cristal Villalba @anunicorn1um!
#SingleCellResearch #TrigeminalGanglion #CraniofacialPain #MiceResearch
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4 Oct 2023
New dataset added! 🧠Come explore this new Alzheimer's Disease and aging brain atlas across 400 human brains from the ROSMAP project. Many thanks to our submitter Carles Boix and PIs @manoliskellis @DrLiHueiTsai
cells.ucsc.edu/?ds=rosmap-ad… #agingbrain #alzheimersdisease
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10 Jul 2023
We love seeing this number grow year after year 🌎🌍🌏 #Diversity #community #HCA2023GM #singlecell #humancellatlas
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10 Jul 2023
9 Jul 2023
We’re really looking forward to #HCA2023GM starting tomorrow!
To join us virtually, be sure to register at events.humancellatlas.org/20….
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UCSC Cell Browser retweeted
15 Mar 2023
To spatially dive into the datasets, check out the webbrowsers at:
web.atlasxomics.com/visualiz…
or
brain-spatial-omics.cells.uc…
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UCSC Cell Browser retweeted
30 Mar 2023
We propose the ectodermal muscle may be a novel anthozoan muscle cell type. The single cell data is housed on the UCSC @cellbrowser! Thanks to @UlrichTechnau and all co-authors for making this possible. 4/4
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19 Jan 2023
Newly published dataset! Come view snRNA-seq data of brain samples from DAP12-deficient Nasu-Hakola diseased individuals here: nhd-brain.cells.ucsc.edu
Submitted by @YingyueZhou at @TheColonnaLab
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9 Nov 2022
New dataset added! Come view glia diversity in the human hippocampus. hippo-lifespan.cells.ucsc.ed…
Submitted by @YijingSu2022 @zhoujoeyyi @Upenn_SongMing
#snRNAseq #singlenucleus #transcriptomics
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UCSC Cell Browser retweeted
4 Nov 2022
Thrilled to share our work on spatial cell type mapping of MS lesions spearheaded by @Cels121 and @PauBadiaM | paired single-cell & spatial transcriptomics | Thanks @saezlab, Simon Hametner, @DenisSchapiro @cellbrowser biorxiv.org/content/10.1101/…
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3 Nov 2022
Sawasdee 🙏! The UCSC Team is here at the #HCA2022Asia meeting in Bangkok! Come check out our posters tomorrow Nov 4th at posters #25 and #26. #SingleCell #visualization @humancellatlas
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